BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig96
(1598 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 2054.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 2054.21 bits (1036.0), Expect = 0.0
Identities = 1144/1183 (97%)
Strand = Plus/Plus
Query: 3 CGGGAACCCTGATCTAGATACAGTAGGATCAATTGAGTTAGCAAATCTAATGTGCGTACA 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 318362 CGGGAACCCTGATCTAGACACAGTAGGATCAATTGAGTTAGCAAATCTAATGTGCGTACA 318421
Query: 63 AGCATCCCTTTCCTTTTATTTTGGAATTTGGCACTATTTAAATAAAAAATAACCTACAAT 122
|||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 318422 AGCATCTTTTTCCTTTTATTTTTGAATTTGGCACTATTTAAATAAAAAAGAACCTACAAT 318481
Query: 123 AAGGTTTTCTTCCTTAAACACTAACCCGGCCAAGACTCACCAATAAGGTAACTCCGCCCT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318482 AAGGTTTTCTTCCTTAAACACTAACCCGGCCAAGACTCACCAATAAGGTAACTCCGCCCT 318541
Query: 183 GTGTTTTTTGGATCAAATCCGGTGACAATTCTCCACTCATGTCCTTCCAGAGCTGGGTAA 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318542 GTGTTTTTTGGATCAAATCCGGTGACAATTCTCCACTCATGTCCTTCCAGAGCTGGGTAA 318601
Query: 243 GTGATCTTCAAGGGCATCTCCCCGATCCATTCTTCCCAGCGCCCCTCAATCAAATCCATA 302
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 318602 GTGATCTTCAAGGGCATCTCCCCGATCCATTCTTCCCAGCGCTCCTCAATCAGATCCATA 318661
Query: 303 ACTGCTGTTGCTTGTGCAGGAGTAACTAGAGAACTTCAAATTGCAATAAAAAAGTTGTCA 362
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 318662 ACTGCTGTTGCTTGTGCAGGAGTAACTAGAGAACTTAAAATTGCAAT---AAAGTTGTCA 318718
Query: 363 ACTAAGAAAGACCGGAAGTCCATGCGAGCCGGGCTGATATTAACCAAAAAGATACCCTCC 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318719 ACTAAGAAAGACCGGAAGTCCATGCGAGCCGGGCTGATATTAACCAAAAAGATACCCTCC 318778
Query: 423 TCAAAAGGGCCTGAAATCAAAGACCCAGTCAGGGATAGAGTTGAGAATGACATTAAAATT 482
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318779 TCGAAAGGGCCTGAAATCAAAGACCCAGTCAGGGATAGAGTTGAGAATGACATTAAAATT 318838
Query: 483 GAACAACTGTGTAGGAGTACTAATAAGTTTTGTAAGGGTATAGTTTATTTAATTGAGTGA 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318839 GAACAACTGTGTAGGAGTACTAATAAGTTTTGTAAGGGTATAGTTTATTTAATTGAGTGA 318898
Query: 543 AATTAGGCCAGTAGTCTTTCTGAATGTGATAGCTGAGAACTGTGATTCTTCGCTCGATCA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318899 AATTAGGCCAGTAGTCTTTCTGAATGTGATAGCTGAGAACTGTGATTCTTCGCTCGATCA 318958
Query: 603 ATTCTTGCCATCACGCTCTGGCTTTAGCATCTGCCGAGCACATCTAAGCGAAAAATAGAA 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318959 ATTCTTGCCATCACGCTCTGGCTTTAGCATCTGCCGAGCACATCTAAGCGAAAAATAGAA 319018
Query: 663 AAAAGTGCCTGGATTTCAATTGGATACCCTTTTTCTCTGTTCCAGGTACAAGTCAAGTTG 722
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319019 AAAA----CTGGATTTCAATTGGATACCCTTTTTCTCTGTTCCAGGTACAAGTCAAGTTG 319074
Query: 723 AATTTACNNNNNNNNNTTCAGTGTTAGAAGTATTCAAATCCATAAATTCACTACGAAACA 782
||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319075 AATTTACAAAAGAGAATTCAGTGTTAGAAGTATTCAAATCCATAAATTCACTACGAAACA 319134
Query: 783 AGGCCGGAACC--------AATTTGAGACTTTGGAAAACTTCAAATAGTAAACTGAAACT 834
||||||||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 319135 AGGCCGGAACCAAGCCCTAAATTTGAGACTTTGGAAAACTGCAAATAGTAAACTTAAACT 319194
Query: 835 ATCAATCATATTAATATTACATCTATCTCCACATAGAAGTGTTGGAAAAGAAAGCTATCT 894
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319195 ATCAATCATATTAATATTACATCCATCTCCACATAGAAGTGTTGGAAAAGAAAGCTATCT 319254
Query: 895 GAGAGGCAGAGGTTGACTATAAACTTCATCTCTCTCTGGACCTCAGGGAGTTTTTCCAGA 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319255 GAGAGGCAGAGGTTGACTATAAACTTCATCTCTCTCTGGACCTCAGGGAGTTTTTCCAGA 319314
Query: 955 GCTGAATTGCGCGTGCACTTCTGCCAGAGCAGAATCACGTGTGTACTTGGTGTATAACCT 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319315 GCTGAATTGCGCGTGCACTTCTGCCAGAGCAGAATCACGTGTGTACTTGGTGTATAACCT 319374
Query: 1015 CAGCAGTATCTTCCATCAGAACCCAAAATCGGCAACGAATATGTCCTTTAGACTTTGCTA 1074
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319375 CAGCAGTATCTTCCATCAGAACCCCAAATCGGCAACGAATATGTCCTTTAGACTTTGCTA 319434
Query: 1075 GAAATGGCCGAACACTAAAAAATCGGTGGAAAACCAGCTTAAGCTGGTTGTACTTTGAAG 1134
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 319435 GAAATGGCCGAACACTAAAAAATAGGTGGAAAACCAGCTTAAGCTGGTTGTACTTTTAAG 319494
Query: 1135 TTCGTTCAATTCACACAGGCAGGGTGATTGAGGTGCGTGCTTC 1177
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319495 TTCGTTCAATTCACACAGGCAGGGTGATTGAGGTGCGTGCTTC 319544
Score = 819.205 bits (413.0), Expect = 0.0
Identities = 416/417 (100%)
Strand = Plus/Minus
Query: 1582 TTCTTCTTACACACAGAAGGTTTTTGCTCTCGTATTGCGGGTTTTCCACTTCGTTCAGTT 1523
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16445 TTCTTCTTAGACACAGAAGGTTTTTGCTCTCGTATTGCGGGTTTTCCACTTCGTTCAGTT 16504
Query: 1522 ACATTAGGGCTTTATACAACTCTACCTTGGTGATTAAGTTCCGCTTTAGTTGGTGTGAAA 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16505 ACATTAGGGCTTTATACAACTCTACCTTGGTGATTAAGTTCCGCTTTAGTTGGTGTGAAA 16564
Query: 1462 TGAGCGGATTCTGGGATAGGAGGTCTTGTCGGTATGGAACCTACCCTTCCGGAGTGAAGG 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16565 TGAGCGGATTCTGGGATAGGAGGTCTTGTCGGTATGGAACCTACCCTTCCGGAGTGAAGG 16624
Query: 1402 ATTGTCATCCTATAGCCGAGTGTTTTTAATTTGGTTTAGAGTCGAGTGATGAAGCTCATG 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16625 ATTGTCATCCTATAGCCGAGTGTTTTTAATTTGGTTTAGAGTCGAGTGATGAAGCTCATG 16684
Query: 1342 ATTCTGCCGTTAGTGAGAAGCAAGTAAACTCTATAGCCCTAAACTAAAGGAGCAGGTCAA 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16685 ATTCTGCCGTTAGTGAGAAGCAAGTAAACTCTATAGCCCTAAACTAAAGGAGCAGGTCAA 16744
Query: 1282 GTTCGTTCAGCTTGAGGGATAAATTACGTGGCTGACCTGCCAGTCCATCAAATATCGTAG 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16745 GTTCGTTCAGCTTGAGGGATAAATTACGTGGCTGACCTGCCAGTCCATCAAATATCGTAG 16804
Query: 1222 TTTATCCTTAAGAGCAGGAGGTTCCTTGTGTGAAACTTAGATGTTGAAGCACGCACC 1166
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16805 TTTATCCTTAAGAGCAGGAGGTTCCTTGTGTGAAACTTAGATGTTGAAGCACGCACC 16861
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597