BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig93
(980 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 868.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 868.764 bits (438.0), Expect = 0.0
Identities = 511/543 (94%)
Strand = Plus/Minus
Query: 975 AAAAGNAAGNNGNTTTCGTGGGNNCATNGATTAGTACNNN-CCGGTGCTGGTAANGNNNG 917
||||| ||| | ||||||||| ||| ||||||||| ||||||||||||| | |
Sbjct: 142002 AAAAGAAAGTTGGTTTCGTGGGTTCATTGATTAGTACACCTCCGGTGCTGGTAAGGCCGG 142061
Query: 916 GNCNGTGNTCNTCCGTCTCCGGTTTGCCGGCCGATACGATNTNTGAGATTGACCAGCCAG 857
| | ||| || ||||||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct: 142062 GACCGTGGTCGTCCGTCTCCGGTTTGCCGGCCGATAAGATCTCTGAGATTGACCAGCCAG 142121
Query: 856 CTGGGTTGGTTTGGCTATTCTTTTCTATTGAAAAGGAGTCAGCTGTCTGCGCGAGTCACC 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142122 CTGGGTTGGTTTGGCTATTCTTTTCTATTGAAAAGGAGTCAGCTGTCTGCGCGAGTCACC 142181
Query: 796 TTCTTCTAGGCTCCGCTGGACGACACGGCATTTTCGTTCAAATATATATAGGCCGGCCGT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142182 TTCTTCTAGGCTCCGCTGGACGACACGGCATTTTCGTTCAAATATATATAGGCCGGCCGT 142241
Query: 736 ACTTGTGATGGTTCCCAAGGATCCAATATGACCACTTAGGTCTACGTTGCCACGATATTG 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142242 ACTTGTGATGGTTCCCAAGGATCCAATATGACCACTTAGGTCTACGTTGCCACGATATTG 142301
Query: 676 TTCTATGGAAGCGGGCGGTTTAGAAGTTCGGCCCGGNNNNNNNGGTGTCGTAGGGGAGGG 617
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142302 TTCTATGGAAGCGGGCGGTTTAGAAGTTCGGCCCGGTTTTTTTGGTGTCGTAGGGGAGGG 142361
Query: 616 ATTGACCTTTCTAACGCATATTCAGTCGTACCGGCATGGCCCCACTGATTTGTTTTCGAT 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142362 ATTGACCTTTCTAACGCATATTCAGTCGTACCGGCATGGCCCCACTGATTTGTTTTCGAT 142421
Query: 556 CGGAGCATCAAGCAGCGCAACCCGGTTCTACTTGACTAAACCCGTGCTCCTCCAAGGAGA 497
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 142422 CGGAGCATCAAGCAGCGCAACCCGGTTCTACTTGACTAAGCCCGTGCTCCTCCAAGGAGA 142481
Query: 496 GAGTTTGCTTTACCCAACTCCCTTTTTGATAACAAGGCAGAAATCCCCGACCCGCCCCTT 437
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 142482 GAGTTTGCTTTACCCAACTCCCTTTTTGATAACAAGGCAGAAATCCCCGACCCGACACTT 142541
Query: 436 GTT 434
|||
Sbjct: 142542 GTT 142544
Score = 823.17 bits (415.0), Expect = 0.0
Identities = 418/419 (100%)
Strand = Plus/Minus
Query: 448 GACCCGCCCCTTGTTTCAGTCAGAATGAGTCCCCGAGACCCCGGGACATTGGCTTCCGCC 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142811 GACCCGCCCCTTGTTTCAGTCAGAATGAGTCCCCGAGACCCCGGGACATTGGCTTCCGCC 142870
Query: 388 AACAGTGAACTATTAAGGATCGCATCCCGCGCATATTCTACATTATAGCCTGCAACTGAT 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142871 AACAGTGAACTATTAAGGATCGCATCCCGCGCATATTCTACATTATAGCCTGCAACTGAT 142930
Query: 328 TCAGCTTCCGCTTCTGGGAGATCAAACGGAGCTCGATTAGTTTCTGCTAGACGAGATATA 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142931 TCAGCTTCCGCTTCTGGGAGATCAAACGGAGCTCGATTAGTTTCTGCTAGACGAGATATA 142990
Query: 268 AAGAACATAACCAATACAGGGAACAAGGGAATACCGGACCATATCTGCTTTTGCGCCATG 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142991 AAGAACATAACCAATACAGGGAACAAGGGAATACCGGACCATATCTGCTTTTGCGCCATG 143050
Query: 208 ACAATCTCACTCGAATTACGGGAACCTACACATATTAGTACAGTATACCGGGGTCCCCGG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143051 ACAATCTCACTCGAATTACGGGAACCTACACATATTAGTACAGTATACCGGGGTCCCCGG 143110
Query: 148 CCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGCCCGTGCTTTCCGAGGCGCTGC 89
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 143111 CCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTGCTTTCCGAGGCGCTGC 143170
Query: 88 CTGTGACTCAGCATGGGAGAAGGGGGCGGAACTGCACACTTTCGTGTTCAGAGCATTGT 30
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143171 CTGTGACTCAGCATGGGAGAAGGGGGCGGAACTGCACACTTTCGTGTTCAGAGCATTGT 143229
Score = 89.6988 bits (45.0), Expect = 4.13999e-19
Identities = 48/49 (98%)
Strand = Plus/Minus
Query: 153 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGCCCGTG 105
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 75453 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTG 75501
Score = 89.6988 bits (45.0), Expect = 4.13999e-19
Identities = 48/49 (98%)
Strand = Plus/Minus
Query: 153 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGCCCGTG 105
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 276953 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTG 277001
Score = 89.6988 bits (45.0), Expect = 4.13999e-19
Identities = 48/49 (98%)
Strand = Plus/Minus
Query: 153 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGCCCGTG 105
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 426203 CCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTG 426251
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597