BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig92
(1547 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 434.6 9.61884e-123
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 434.628 bits (219.0), Expect = 9.61884e-123
Identities = 318/351 (91%)
Strand = Plus/Plus
Query: 1 TATAGGCGTTGGAGGCCCTTAACCCTTTCTTATTATTAGTAAGATAGGTTGTCTTGGTTC 60
||||||| |||||||| |||||| ||||||||||||||| || | |||||||| |||
Sbjct: 249307 TATAGGCCTTGGAGGCGCTTAACTCTTTCTTATTATTAGAAATAATTGTTGTCTTAGTTT 249366
Query: 61 CGTAACATGGTTCAAACCTGGCTTTTCATGAATATGGAACCCCATCCACTAGATTTAAGT 120
| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 249367 CATAACATGTTTCAACCCCGGCTTTTCATGAATATGGAACCCCATCCACTAGATTTTAGT 249426
Query: 121 GCGCTGAATAATTGTCCTTTCCTCGTACGCATTTGAGTACTCAAGGCCCCCTTTCTTTTG 180
| ||||||||||| || | ||||| | | |||| ||||||||||||||||||
Sbjct: 249427 GTGCTGAATAATTATCTT-----CGTACTCCAATCCGTACGAAAGGCCCCCTTTCTTTTG 249481
Query: 181 GCGGGTATCGCCACGTGGCTTAATCCCGGATCACTCCTTAAGGAATAGGACACAATAATA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249482 GCGGGTATCGCCACGTGGCTTAATCCCGGATCACTCCTTAAGGAATAGGACACAATAATA 249541
Query: 241 TAGCGCACATCAGAGAAGAGAGTACCCCCTTTATTATAAGACAGGCCCCCCGCGTCCTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249542 TAGCGCACATCAGAGAAGAGAGTACCCCCTTTATTATAAGACAGGCCCCCCGCGTCCTTT 249601
Query: 301 CTTAAGAGATGGAGCAATCGTCACTCGACAGCTCAAAACTGACCAGTACAA 351
||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 249602 CTTAAGAGATGGAGCAATCGTCACTCGACAGCTCAAAGCTGACCGGTACAA 249657
Score = 212.605 bits (107.0), Expect = 6.59025e-56
Identities = 135/143 (94%)
Strand = Plus/Plus
Query: 465 CAATCGTCACTCGACAGCTCAAAGCTGACCGGTACAACCCGCGTGCTTGCCTACTCGTCT 524
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249616 CAATCGTCACTCGACAGCTCAAAGCTGACCGGTACAACCCGCGTGCTTGCCTACTCGTC- 249674
Query: 525 TTCACCGGCCTATTTGTACCCAGCTACAATCTCTTCCCTTATAAAAGAAAAAAGGG-CCC 583
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 249675 ----CCGGCCTATTTGTACCCAGCTACAATCTCTTCCCTTATAAAAGAAAAAAGGGCCCC 249730
Query: 584 TCGGCCAATCCTCAATCGACAGC 606
|||||||||| ||| ||||||||
Sbjct: 249731 TCGGCCAATCGTCACTCGACAGC 249758
Score = 69.8753 bits (35.0), Expect = 6.09201e-13
Identities = 60/67 (90%)
Strand = Plus/Plus
Query: 315 CAATCGTCACTCGACAGCTCAAAA-CTGACCAGTACAAAACCATGTGATCTGTCCTCGTT 373
|||||||||||||||||||| ||| | || ||||| ||||||||||||||||| || |||
Sbjct: 249736 CAATCGTCACTCGACAGCTCGAAAGCGGATCAGTAAAAAACCATGTGATCTGTACTTGTT 249795
Query: 374 TACGTAC 380
|||||||
Sbjct: 249796 TACGTAC 249802
Score = 57.9812 bits (29.0), Expect = 2.31872e-09
Identities = 29/29 (100%)
Strand = Plus/Plus
Query: 456 CCCCTCGGCCAATCGTCACTCGACAGCTC 484
|||||||||||||||||||||||||||||
Sbjct: 249727 CCCCTCGGCCAATCGTCACTCGACAGCTC 249755
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597