BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig89
(976 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1126.5 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1126.47 bits (568.0), Expect = 0.0
Identities = 610/624 (98%)
Strand = Plus/Minus
Query: 619 TTCCCCTTCTCCGGATTTACCCGGTGAGCACAACTCTTGCTCGGGTAGGTGGTGCCGGTT 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146829 TTCCCCTTCTCCGGATTTACCCGGTGAGCACAACTCTTGCTCGGGTAGGTGGTGCCGGTT 146888
Query: 559 TCCGGCAACTTGCTAAATTCCACCATGCAGCGGCCATCGCCTACCCTAATGCTCCTGCTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146889 TCCGGCAACTTGCTAAATTCCACCATGCAGCGGCCATCGCCTACCCTAATGCTCCTGCTC 146948
Query: 499 CGGACCTTACTGCTGGCTTTGCTTTGAGCTTTCTTGCTTGCTATGCGCCAGCTAGCGGAA 440
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 146949 CGGACCTTACTGCTGGCTT-----TGAGCTTTCTTGCTTGCTATGCGCCAGCTAGCGGAA 147003
Query: 439 TGCTTTACCGAATGCGCCAACCAACCTCTGGTGTCGGGCCTACGTGTGCCAACTCCAACT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147004 TGCTTTACCGAATGCGCCAACCAACCTCTGGTGTCGGGCCTACGTGTGCCAACTCCAACT 147063
Query: 379 AGGAAACTACTACCGCTTGGGCCTAAGCTCCTGAACCGGCAGGAAGAAGAAGCGCACCCG 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147064 AGGAAACTACTACCGCTTGGGCCTAAGCTCCTGAACCGGCAGGAAGAAGAAGCGCACCCG 147123
Query: 319 AACCCCCCTTCTTACTACCCTTTCAGAAGGTGAGGCAGAAGGATTGAGATTCTCGTAAGT 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147124 AACCCCCCTTCTTACTACCCTTTCAGAAGGTGAGGCAGAAGGATTGAGATTCTCGTAAGT 147183
Query: 259 AATGTTCGAAAGCACTGTTCCTTGATCAAGTAATTAAGAGATCTCCTTATTAAACCCTTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147184 AATGTTCGAAAGCACTGTTCCTTGATCAAGTAATTAAGAGATCTCCTTATTAAACCCTTA 147243
Query: 199 TTCAAT-----ATTTTGCATACAAAGCAGAGGTGCGAAGCGAAGGTGCGGTCCAGCTGCA 145
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 147244 TTCAATATTTGATTTTGCATACAAACCAGAGGTGCGAAGCGAAGGTGCGGTCCAGCTGCA 147303
Query: 144 GGAAAGACCAATCGCAGAGACAAATTAAAAGAGATTCCCGCCTCCGGGCGGGGGTTCCCC 85
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 147304 GGAAAGACCAATCGCAGAGACAAATTCAAAGAGATTCCCGCCTCCGGGCGGGGGTTCCCC 147363
Query: 84 GCGGGGCTATTACACGTATTCCCCCCGGGGGTAGCTACAAGCATAAACCGGTTTAATAAA 25
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 147364 GCGGGGCTATTACACGTATTCCCCCCGGGGGTAGCTACAAGCATAAACCGGTTTATAAAA 147423
Query: 24 TTACGTAGAGTGATCGCAGAAACT 1
||||||||||||||||||||||||
Sbjct: 147424 TTACGTAGAGTGATCGCAGAAACT 147452
Score = 161.064 bits (81.0), Expect = 1.35603e-40
Identities = 81/81 (100%)
Strand = Plus/Plus
Query: 646 GTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199436 GTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTC 199495
Query: 706 GAATCCTACTTGGGGAGATTT 726
|||||||||||||||||||||
Sbjct: 199496 GAATCCTACTTGGGGAGATTT 199516
Score = 46.087 bits (23.0), Expect = 5.54184e-06
Identities = 23/23 (100%)
Strand = Plus/Minus
Query: 614 CTTCTCCGGATTTACCCGGTGAG 592
|||||||||||||||||||||||
Sbjct: 241953 CTTCTCCGGATTTACCCGGTGAG 241975
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597