BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig83
(1339 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 2327.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 2327.78 bits (1174.0), Expect = 0.0
Identities = 1212/1227 (99%)
Strand = Plus/Plus
Query: 113 GCCACGGTAGATCTTTTTCTTTGCCTTTCAAGATATTGCGTATAAAGAGAAAGATAGCCA 172
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152035 GCCAAGGTAGATGTTTTTCTTTGCCTTTCAAGATATTGCGTATAAAGAGAAAGATAGCCA 152094
Query: 173 GTCCTCTTGGGCGGCCGAGAGTGTTATGTAAAAAGGACCAAGGAGGATCCTATCCTAAAG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152095 GTCCTCTTGGGCGGCCGAGAGTGTTATGTAAAAAGGACCAAGGAGGATCCTATCCTAAAG 152154
Query: 233 GAGAAGGAGGAGGAGTAGGAGCTAGCTTTAGGGGCGGAATCGAAGCGAAGAAATTCGTTC 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 152155 GAGAAGGAGGAGGAGTAGGAGCTAGCTTTAGGGGCGGAATCGAAGCGAAGAAATTAGTTC 152214
Query: 293 ATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCCTCTTGAGAATGAAG 352
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 152215 ATGCCACGACGATCTATATGGAAGGGAAGTTTTGTTGATGCATTCCTCTTGAGAATGAAG 152274
Query: 353 AAGAAGAGAGATCTTCTTTTTAACAGGAAAATTTGGTCACGTAGATCTTCTATTTCGCCG 412
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152275 AAGAAGAGAGATCCTCTTTTTAACAGGAAAATTTGGTCACGTAGATCTTCTATTTCGCCG 152334
Query: 413 GAATTCGTTGATTGCTCCGTACGAATTTACAATGGAAAAACTCCTGTTCGTTGTAAGATT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152335 GAATTCGTTGATTGCTCCGTACGAATTTACAATGGAAAAACTCCTGTTCGTTGTAAGATT 152394
Query: 473 ACTGAAGGAAAGGTTGGTCATAAATTTGGAGAGTTTGCTTCTACACGGAAACGAAGACCT 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152395 ACTGAAGGAAAGGTTGGTCATAAATTTGGAGAGTTTGCTTCTACACGGAAACGAAGACCT 152454
Query: 533 TCGAGAACAAATATTGGACCGGGAAGAAAAAGGGGGAAAAAGTAAAGTCTAAGCGCATAT 592
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 152455 TCGAGAACAAATATTGGACCGGGAAGAAAAAAGGGGAAAAAGTAAAGTCTAAGCGCATAT 152514
Query: 593 GGCACGAAAAGGAAATCCTATTTCGGTAAGACTTGATCTGAATCGTAGTTCAGATTCAAG 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152515 GGCACGAAAAGGAAATCCTATTTCGGTAAGACTTGATCTGAATCGTAGTTCAGATTCAAG 152574
Query: 653 TTGGTTTAGTGAGGGCGACCGCGAAAGTCACCGAATGGGTCAGTCTTTTAGTTCTCCCAG 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152575 TTGGTTTAGTGAGGGCGACCGCGAAAGTCACCGAATGGGTCAGTCTTTTAGTTCTCCCAG 152634
Query: 713 ATTAGAATATCAAAGGAGGACGTTGCAGATGCCGGGGGCGGACACGACTTCTTCTAAGGC 772
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 152635 ATTAGAATATCAAAGGAGGACGTTGCAGATGCCCGGGGCGGACACGACTTCTTCTAAGGC 152694
Query: 773 TAGAAGACCACTGGAAGACACCCAGGACTATAGCATGTCGTGAAAGAAGCACACTGGACG 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152695 TAGAAGACCACTGGAAGACACCCAGGACTATAGCATGTCGTGAAAGAAGCACACTGGACG 152754
Query: 833 GGCGTGCTTCGACCGTGTCTCCGGGGCACAGTTGAATGTAGATATCATGAACGCGAGGTG 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152755 GGCGTGCTTCGACCGTGTCTCCGGGGCACAGTTGAATGTAGATATCATGAACGCGAGGTG 152814
Query: 893 CAGGATACCAGGCCGAGAAACCCGGGCAACCATTCCCCTATGTGCCAATCGCTAGCGCAT 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152815 CAGGATACCAGGCCGAGAAACCCGGGCAACCATTCCCCTATGTGCCAATCGCTAGCGCAT 152874
Query: 953 CCAGGGCCCCGGCGCCCAGCTCAGCTGGAGAGGCCTAGCCTGATCTGAGAAGTGCTAATT 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152875 CCAGGGCCCCGGCGCCCAGCTCAGCTGGAGAGGCCTAGCCTGATCTGAGAAGTGCTAATT 152934
Query: 1013 CGGTTCGGATAGACTTCATTCAAGAATGCCACCGCCCCGGGAATCAATAAGAAAACAAGT 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152935 CGGTTCGGATAGACTTCATTCAAGAATGCCACCGCCCCGGGAATCAATAAGAAAACAAGT 152994
Query: 1073 GCTAAGTTTCAGATCAGTGAATAAACCGAAAGGAAAGAAGAGACCTTTCTCGCTCAGCGC 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152995 GCTAAGTTTCAGATCAGTGAATAAACCGAAAGGAAAGAAGAGACCTTTCTCGCTCAGCGC 153054
Query: 1133 CTAAAGCGCACTATGCTCCGCTTCAACAAATGAGAGTTTTCGGTGGAACCGGTGAACCAC 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153055 CTAAAGCGCACTATGCTCCGCTTCAACAAATGAGAGTTTTCGGTGGAACCGGTGAACCAC 153114
Query: 1193 GCGAGCTGGTTAGATGCGTGGGACAGAGGGCTCGTAGTACCTGCTAGCGCGGCTACGCAG 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153115 GCGAGCTGGTTAGATGCGTGGGACAGAGGGCTCGTAGTACCTGCTAGCGCGGCTACGCAG 153174
Query: 1253 TGGAAGGGAAGGAGCCTAAATCGACCCCCTTCNNNNNNNCTTTGAAAAAAGCAGTAAGGA 1312
||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 153175 TGGAAGGGAAGGAGCCTAAATCGACCCCCCTCTTTTTTTCTTTGAAAAAAGCAGTAAGGA 153234
Query: 1313 GTAAGGAGATTAAACTCTCGGATGAGA 1339
|||||||||||||||||||||||||||
Sbjct: 153235 GTAAGGAGATTAAACTCTCGGATGAGA 153261
Score = 291.899 bits (147.0), Expect = 7.6844e-80
Identities = 150/151 (99%)
Strand = Plus/Minus
Query: 276 TTCGATTCCGCCCCTAAAGCTAGCTCCTACTCCTCCTCCTTCTCCTTTAGGATAGGATCC 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363966 TTCGATTCCGCCCCTAAAGCTAGCTCCTACTCCTCCTCCTTCTCCTTTAGGATAGGATCC 364025
Query: 216 TCCTTGGTCCTTTTTACATAACACTCTCGGCCGCCCAAGAGGACTGGCTATCTTTCTCTT 157
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 364026 TCCTTGGTCCTTTTTACATAACACTCTTGGCCGCCCAAGAGGACTGGCTATCTTTCTCTT 364085
Query: 156 TATACGCAATATCTTGAAAGGCAAAGAAAAA 126
|||||||||||||||||||||||||||||||
Sbjct: 364086 TATACGCAATATCTTGAAAGGCAAAGAAAAA 364116
Score = 238.375 bits (120.0), Expect = 9.94963e-64
Identities = 123/124 (99%)
Strand = Plus/Minus
Query: 124 ATCTACCGTGGCCTTATGTTGGCATGGGATTTGGGTTACAAGCAGGTCATTCTTGAAACA 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58341 ATCTACCGTGGCCTTATGTTGGCATGGGATTTGGGTTACAAGCAGGTCATTCTTGAAACT 58400
Query: 64 GATTTTGAATATTGTTTGCATGCTGTGATTCATTTGATTTCCTCTAATCACCCTCAAGCA 5
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58401 GATTTTGAATATTGTTTGCATGCTGTGATTCATTTGATTTCCTCTAATCACCCTCAAGCA 58460
Query: 4 CAAC 1
||||
Sbjct: 58461 CAAC 58464
Score = 238.375 bits (120.0), Expect = 9.94963e-64
Identities = 123/124 (99%)
Strand = Plus/Minus
Query: 124 ATCTACCGTGGCCTTATGTTGGCATGGGATTTGGGTTACAAGCAGGTCATTCTTGAAACA 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409091 ATCTACCGTGGCCTTATGTTGGCATGGGATTTGGGTTACAAGCAGGTCATTCTTGAAACT 409150
Query: 64 GATTTTGAATATTGTTTGCATGCTGTGATTCATTTGATTTCCTCTAATCACCCTCAAGCA 5
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409151 GATTTTGAATATTGTTTGCATGCTGTGATTCATTTGATTTCCTCTAATCACCCTCAAGCA 409210
Query: 4 CAAC 1
||||
Sbjct: 409211 CAAC 409214
Score = 172.958 bits (87.0), Expect = 4.90334e-44
Identities = 90/91 (99%)
Strand = Plus/Minus
Query: 276 TTCGATTCCGCCCCTAAAGCTAGCTCCTACTCCTCCTCCTTCTCCTTTAGGATAGGATCC 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132694 TTCGATTCCGCCCCTAAAGCTAGCTCCTACTCCTCCTCCTTCTCCTTTAGGATAGGATCC 132753
Query: 216 TCCTTGGTCCTTTTTACATAACACTCTCGGC 186
||||||||||||||||||||||| |||||||
Sbjct: 132754 TCCTTGGTCCTTTTTACATAACATTCTCGGC 132784
Score = 115.469 bits (58.0), Expect = 9.91254e-27
Identities = 61/62 (98%)
Strand = Plus/Plus
Query: 1172 TCGGTGGAACCGGTGAACCACGCGAGCTGGTTAGATGCGTGGGACAGAGGGCTCGTAGTA 1231
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 192784 TCGGTGGAACCGGTGAACCACGCGAGCTGGTTAGATGCGTGGGGCAGAGGGCTCGTAGTA 192843
Query: 1232 CC 1233
||
Sbjct: 192844 CC 192845
Score = 81.7694 bits (41.0), Expect = 1.38325e-16
Identities = 47/49 (96%)
Strand = Plus/Minus
Query: 253 CTCCTACTCCTCCTCCTTCTCCTTTAGGATAGGATCCTCCTTGGTCCTT 205
||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 360805 CTCCTCCTACTCCTCCTTCTCCTTTAGGATAGGATCCTCCTTGGTCCTT 360853
Score = 55.9988 bits (28.0), Expect = 7.91819e-09
Identities = 37/40 (92%)
Strand = Plus/Minus
Query: 1237 AGCAGGTACTACGAGCCCTCTGTCCCACGCATCTAACCAG 1198
||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 379022 AGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAG 379061
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597