BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig79
(1652 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 515.9 3.50948e-147
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 515.905 bits (260.0), Expect = 3.50948e-147
Identities = 266/268 (99%)
Strand = Plus/Plus
Query: 1 TCGGCGACCGCTCGACCTAGCGCGTTAGCCCCAGTACTATAGGGAAGGCCTATGCGAAGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250753 TCGGCGACCGCTCGACCTAGCGCGTTAGCCCCAGTACTATAGGGAAGGCCTATGCGAAGA 250812
Query: 61 AAAGGCCTGCCCATCATCAAAGCAAGCCCAAGTCCATGCAAGAAGGCCCTCCAGATCTGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250813 AAAGGCCTGCCCATCATCAAAGCAAGCCCAAGTCCATGCAAGAAGGCCCTCCAGATCTGT 250872
Query: 121 CCAAATTCAAAGCCCGTCAAAGGCATATGAAATCATGCAAAGGATCCGAGCCCATCCAAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250873 CCAAATTCAAAGCCCGTCAAAGGCATATGAAATCATGCAAAGGATCCGAGCCCATCCAAA 250932
Query: 181 TGATGTTCAGCGGGCTAAACCCAAGTAGCTCTGGCCCATGATCCAAGAGACCCGAAACTC 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250933 TGATGTTCAGCGGGCTAAACCCAAGTAGCTCTGGCCCATGATCCAAGAGACCCGAAACTA 250992
Query: 241 GTTCATCATGCTATCCTTACCTTCTAAC 268
||| ||||||||||||||||||||||||
Sbjct: 250993 GTTAATCATGCTATCCTTACCTTCTAAC 251020
Score = 228.464 bits (115.0), Expect = 1.18497e-60
Identities = 245/290 (84%)
Strand = Plus/Minus
Query: 1616 ATTAAAGCACTGGAAGAGAATCGCTATCGTCTTTCTAAA-GGACGGGG-------TGTAT 1565
|||||||||||||||||||||||||||| |||||||||| |||||||| | |||
Sbjct: 404279 ATTAAAGCACTGGAAGAGAATCGCTATCCTCTTTCTAAAAGGACGGGGATTTAGGTCTAT 404338
Query: 1564 TGCTTATGTCCGATTTGCTGACGCTAGCTTGACTTCACTCACTTCAGAGACAGNNNNNNN 1505
||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 404339 TGCTTATGTCCGATTTGCTGAGGCTAGCTTGACTTCACTCACTTCAGAGAGA-------- 404390
Query: 1504 GAATAAGAGAATAAGAAAGGAGCGTAGCAGCC------AGAAAGAAATCCCCTCTTCCGC 1451
||| || ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 404391 GAAAAAAAGAATAAGAAAGGAGCGTAGCAGCCAGAAAGAGAAAGAAATCCCCTCTTCCGC 404450
Query: 1450 TTAAGGCACCGAAGTCCCACAGCTAATATC--------TTGATTTAAGGGAAGTTCTTTC 1399
|||||||||||||||||| |||||||||| | |||| |||||||||||||||
Sbjct: 404451 TTAAGGCACCGAAGTCCCTGAGCTAATATCAATAGCAGTAGATTCAAGGGAAGTTCTTTC 404510
Query: 1398 GTTAGCAGTAAGAGCCTATTCTGTCTTGCTTTCTGAATGAATTCCGCTGC 1349
||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 404511 TAGAGCAGTAAGAGCCTATTCTGTCTTGCTTTCTGATTCAATTCCGCTGC 404568
Score = 85.7341 bits (43.0), Expect = 1.09538e-17
Identities = 58/63 (92%)
Strand = Plus/Minus
Query: 142 CTTTGACGGGCTTTGAATTTGGACAGATCTGGAGGGCCTTCTTGCATGGACTTGGGCTTG 83
|||||| |||||||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct: 369718 CTTTGATGGGCTTTGAATTTGGATAGATCCAGTGGGCCTTCTTGCATGGACTTGGGCTTG 369777
Query: 82 CTT 80
|||
Sbjct: 369778 CTT 369780
Score = 44.1047 bits (22.0), Expect = 3.72627e-05
Identities = 28/30 (93%)
Strand = Plus/Plus
Query: 72 CATCATCAAAGCAAGCCCAAGTCCATGCAA 101
||||||||||||||| ||||| ||||||||
Sbjct: 137512 CATCATCAAAGCAAGTCCAAGCCCATGCAA 137541
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597