BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig77
(2029 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1384.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1384.18 bits (698.0), Expect = 0.0
Identities = 760/781 (97%)
Strand = Plus/Minus
Query: 2012 TAGCCGCGAGCAATCTACGTTTGTGATCTCGTATATTTCGCTTCTCCGACATCTTACTGA 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43650 TAGCCGCGAGCAATCTACGTTTGTGATCTCGTATATTTCGCTTCTCCGACATCTTACTGA 43709
Query: 1952 GTTTCCCCCTCATCTTTTTGCAAAAAGCCGCTCCACGGTGGTAAAGTCTCATCTTGTGTG 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43710 GTTTCCCCCTCATCTTTTTGCAAAAAGCCGCTCCACGGTGGTAAAGTCTCATCTTGTGTG 43769
Query: 1892 TTGGCCGAAGTTACAATAGTAACATTGAACCCTCGAATATGTTCGAAGATCTCGAAATGA 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43770 TTGGCCGAAGTTACAATAGTAACATTGAACCCTCGAATATGTTCGAAGATCTCGAAATGA 43829
Query: 1832 TCTTCCAGTTCGGGGGAGAATTCGCAAAATTCCGTTTCCATCGAGAATTGAATTGACCTT 1773
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 43830 TCTTCCAGTTCGGGGGAGAATTCGCAAAATTCCGTTTCCATCGAGAATAGAATTGACCTT 43889
Query: 1772 TCCCTTATTTCGAGCGGAGAATCTAACAGAGACATTACTGTGGATATTCTGACCAAAAAA 1713
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43890 TCCCTTATTTCGACCGGAGAATCTAACAGAGACATTACTGTGGATATTCTGACCAAAAAA 43949
Query: 1712 TGTGACATTCCATGCCCTCGGAGAGTGCTTTGTCGTGCTAGGTCACTGACATATCCTTTT 1653
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43950 TTAGACATTCCATGCCCTCGGAGAGTGCTTTGTCGTGCTAGGTCACTGACATATCCTTTT 44009
Query: 1652 TTGTCTTTATTTGACCCCAAGAATGGATTGGATCGAAACGACTTTCCTGTTGAAGCCCTT 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44010 TTGTCTTTATTTGACCCCAAGAATGGATTGGATCGAAACGACTTTCCTGTTGAAGCCCTT 44069
Query: 1592 ------TGTTTTAATTTCTGGCCGCACGGAATCTCCATAGCCAATTTTCCATTTTTGATA 1539
||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 44070 TGTGTCTGTATTAATTTCTGACCGCACGGAATCTCCATAGCCAATTTTCCATTTTTGATA 44129
Query: 1538 GAAGGTGCTGTCTTTGGTACTACTATTATTTTACACGATCCAGGAACTTCCATAACGTTG 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44130 GAAGGTGCTGTCTTTGGTACTACTATTATTTTACACGATCCAGGAACTTCCATAACGTTG 44189
Query: 1478 GCGTGATTCGGTTTGAGCAACGGATCCTGACGTGATACATCCTCGTAATGAAAATAGAGT 1419
||||||||||||||||||||| ||||||||||||| | || ||||||||||||||||||
Sbjct: 44190 GCGTGATTCGGTTTGAGCAACAGATCCTGACGTGAGAGATTTTCGTAATGAAAATAGAGT 44249
Query: 1418 GGAAACATGAGTTGATCCATAATGAGTATTAGATTGAAGTTCTCTTAAAGAAGACCGCCA 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44250 GGAAACATGAGTTGATCCATAATGAGTATTAGATTGAAGTTCTCTTAAAGAAGACCGCCA 44309
Query: 1358 ACTCCTATCCCGAAGATACAAAGCGCCCGGTCCTCTTCTCTTGTGTCGAAGTGTAGTGTA 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44310 ACTCCTATCCCGAAGATACAAAGCGCCCGGTCCTCTTCTCTTGTGTCGAAGTGTAGTGTA 44369
Query: 1298 GTGTGGTGAGGTTTTGCCTCACAGAAAGAGTGGGAAATTGGGATCAAAAAAGGCAGAATT 1239
||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 44370 GTGTGGTGAGGTTTTGCCTCACAGAAAGAGTGGGAAATTGGGAGAAAAAAACGAAGAATT 44429
Query: 1238 T 1238
|
Sbjct: 44430 T 44430
Score = 254.234 bits (128.0), Expect = 2.5468e-68
Identities = 199/228 (87%)
Strand = Plus/Plus
Query: 7 AGCTGCCTGANGAGAGGAAGGGACGCCGGGTACAATCTTTCTTTGNTTCCAGCCCCCCGG 66
|||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 215170 AGCTGCCTGATGAGAGGAAGGGACGCCGGGTACAGTCTTTCTTTGGTTCCAGCCCCCCGG 215229
Query: 67 TTACACCAAAGCACACCAGTCAACACTGTACTATAGCGCTTACACCTGTGAGTTGGCAAA 126
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 215230 TTACACCAAAGCACACCAGTCAACACTGTACTATAGCGCTTACACCTGTGAGGTGGCACG 215289
Query: 127 ATAATATCGTATGTTAATAAAAGACCTGAGTTGGCGNNNNNNNNNNNNNNNNNNNGCTAA 186
|||||||||||| | ||||||| ||||||||||||| |||||
Sbjct: 215290 ATAATATCGTATATAAATAAAACACCTGAGTTGGCG------AAATAAAAAAAAAGCTAA 215343
Query: 187 CGCTAACTAAGTGTTTAGTTACCATGCCCAAAAGCCCCATGCCTTTCC 234
|||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 215344 CGCTAACTAAGTGTTTAGTTACCATGCCCAAAAGTCCCATGCCTTTCC 215397
Score = 99.6106 bits (50.0), Expect = 8.96067e-22
Identities = 65/70 (93%)
Strand = Plus/Plus
Query: 297 TAAGAAAGGACAAAGAAAAATGAATATCATGTTTACACCGATCGGATTTCAAAAAGTCCT 356
|||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 260383 TAAGAAAGGACAAAGATTAATTAATATCATGTTTACACCGATCGGATTTCTAAAAGTCCT 260442
Query: 357 TCGACCCTTA 366
||| ||||||
Sbjct: 260443 TCGCCCCTTA 260452
Score = 99.6106 bits (50.0), Expect = 8.96067e-22
Identities = 65/70 (93%)
Strand = Plus/Minus
Query: 366 TAAGGGTCGAAGGACTTTTTGAAATCCGATCGGTGTAAACATGATATTCATTTTTCTTTG 307
|||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 318006 TAAGGGGCGAAGGACTTTTAGAAATCCGATCGGTGTAAACATGATATTAATTAGTCTTTG 318065
Query: 306 TCCTTTCTTA 297
||||||||||
Sbjct: 318066 TCCTTTCTTA 318075
Score = 55.9988 bits (28.0), Expect = 1.20447e-08
Identities = 31/32 (97%)
Strand = Plus/Minus
Query: 1972 CTTCTCCGACATCTTACTGAGTTTCCCCCTCA 1941
|||||||||||||||||||| |||||||||||
Sbjct: 394212 CTTCTCCGACATCTTACTGACTTTCCCCCTCA 394243
Score = 52.0341 bits (26.0), Expect = 1.88059e-07
Identities = 65/78 (83%)
Strand = Plus/Plus
Query: 1144 ATTCTCCAGTTGGGTACAGTGCAAAGCCTTCCATTTCGGCGGGTTGAAAGGGCCATAAAG 1203
|||||||| || |||||| |||||| |||||||||||||| ||||||| ||||| ||
Sbjct: 156105 ATTCTCCATTTTGGTACACGCCAAAGCGTTCCATTTCGGCGGATTGAAAGAGCCATCAAT 156164
Query: 1204 GACTTTAATCTCTTTCTT 1221
||| | |||||||||||
Sbjct: 156165 CACTATGATCTCTTTCTT 156182
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597