BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig267
(1857 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 3424.0 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 3424.02 bits (1727.0), Expect = 0.0
Identities = 1802/1835 (98%)
Strand = Plus/Minus
Query: 1843 GGGGAGNTNATTNGACCCATNCCCCANNNNCCCGCNCTGCTCAAGTAAGNGTGCGACTCC 1784
|||||| | ||| ||||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 378890 GGGGAGTTTATTCGACCCATTCCCCAGTCTCCCGCACTGCTCAAGTAAGTGTGCGACTCC 378949
Query: 1783 GTATGAGGACCTCNTTNTNTTCTGCCCACTCTCCGTTCACACGGTTCTCAAAGCAGAGGA 1724
||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 378950 GTATGAGGACCTCCTTCTCTTCTGCCCACTCTCCGTTCACACGGTTCTCAAAGCAGAGGA 379009
Query: 1723 GGAAGGGTGGGCAGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGT 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379010 GGAAGGGTGGGCAGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGT 379069
Query: 1663 GTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAG 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379070 GTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAG 379129
Query: 1603 TTATGCTTCGGATGCTTCACCATAGAATAGATCGATCCAGTTCCCGTTCTTTTCCGGTGC 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379130 TTATGCTTCGGATGCTTCACCATAGAATAGATCGATCCAGTTCCCGTTCTTTTCCGGTGC 379189
Query: 1543 ACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGGAAGCAGCCCTAGCC 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379190 ACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGGAAGCAGCCCTAGCC 379249
Query: 1483 TCTGTCCGGCCGATCATTCCGCTGGCATCTCGCATTCACGCCCCCGTTTGACTGCCGCTC 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379250 TCTGTCCGGCCGATCATTCCGCTGGCATCTCGCATTCACGCCCCCGTTTGACTGCCGCTC 379309
Query: 1423 GGGGATGTAGTTGTAGATAGGTTAGTCTTAGTGGGTCGTTGGCTCCACCTGTTATCTCCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379310 GGGGATGTAGTTGTAGATAGGTTAGTCTTAGTGGGTCGTTGGCTCCACCTGTTATCTCCT 379369
Query: 1363 TCTACGACATGCTGTTGTCGTCGCCATATTCCATATGTCACTTAGTCATCTCTGCCTCGC 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379370 TCTACGACATGCTGTTGTCGTCGCCATATTCCATATGTCACTTAGTCATCTCTGCCTCGC 379429
Query: 1303 TGCGGGTCAGCACCTCCGAAAGAAACGGAGGACTTCATTCAGTGACCCCGCGATCGCCCT 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379430 TGCGGGTCAGCACCTCCGAAAGAAACGGAGGACTTCATTCAGTGACCCCGCGATCGCCCT 379489
Query: 1243 CTGAACGATCAGAATAAGGTAAAGCTTGAAGATAAGTTTTGTACTCAATTAATTTCTCAG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379490 CTGAACGATCAGAATAAGGTAAAGCTTGAAGATAAGTTTTGTACTCAATTAATTTCTCAG 379549
Query: 1183 TCCCTCTAGTCGGGTGGGCGCCGGCCGGTTTTTCGACCAGATCCCCCTAAAAACCGTACG 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379550 TCCCTCTAGTCGGGTGGGCGCCGGCCGGTTTTTCGACCAGATCCCCCTAAAAACCGTACG 379609
Query: 1123 TGCGGGTCTCCCCGCATGCGGCTCACGCCATTCGAGGTGGCCCAGCCCAGCATTCATTCG 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379610 TGCGGGTCTCCCCGCATGCGGCTCACGCCATTCGAGGTGGCCCAGCCCAGCATTCATTCG 379669
Query: 1063 CAAATCCTGTAGTGAAATTGAGACTGCTCAACCTCGGAAGCTAATTCGCGTGTAGGCAGC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379670 CAAATCCTGTAGTGAAATTGAGACTGCTCAACCTCGGAAGCTAATTCGCGTGTAGGCAGC 379729
Query: 1003 GCTGTCTGTCGTACCGTTGACTCTATCTATTCATGGAATTTTCTTTATTTCATTTTCTAT 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379730 GCTGTCTGTCGTACCGTTGACTCTATCTATTCATGGAATTTTCTTTATTTCATTTTCGAT 379789
Query: 943 TTTATATAGGCTCGCTCCCTCTTTTTCCAAGAATTCATCCACTTCCCCTTACTCCATAGG 884
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379790 TTTATATAGGCTCGCTCCCTCTTTTTCCAAGAATTCATCCACTTCCCTTTACTCCATAGG 379849
Query: 883 GCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCGGCCTCCCCTGGCTC 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379850 GCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCGGCCTCCCCTGGCTC 379909
Query: 823 TTCCACCGTCCGGGCTCCCTTTCCTCCCTATGGTATGCTCCCCCGGCGCAGGCCTACCAC 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379910 TTCCACCGTCCGGGCTCCCTTTCCTCCCTATGGTATGCTCCCCCGGCGCAGGCCTACCAC 379969
Query: 763 GCTTCGCGCCTGCGGCGTTTTCGCCAGACGGTCTTTGCCAGTAGTGCCATCCTCCCCGCT 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379970 GCTTCGCGCCTGCGGCGTTTTCGCCAGACGGTCTTTGCCAGTAGTGCCATCCTCCCCGCT 380029
Query: 703 GGCTGTATGGGCGGGTTGTCCCTCGCTGCTGCGTTCTTTTAAGCTATGGATTAAAGGAAC 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380030 GGCTGTATGGGCGGGTTGTCCCTCGCTGCTGCGTTCTTTTAAGCTATGGATTAAAGGAAC 380089
Query: 643 AAATGTAGTTGAATGGAACAGCAGGCGGGTTACACGTTCCACTGTGCCGAGATGTGAGGT 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380090 AAATGTAGTTGAATGGAACAGCAGGCGGGTTACACGTTCCACTGTGCCGAGATGTGAGGT 380149
Query: 583 GCAGGTGGTGATGATCACCCCGGGGTATGCGCTAGCGCCCTTGACAGGCACTCCAGAACC 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380150 GCAGGTGGTGATGATCACCCCGGGGTATGCGCTAGCGCCCTTGACAGGCACTCCAGAACC 380209
Query: 523 CGCCAACGCTCGTGAAAACCCGGGTCGGTCGGTCCTCCATTCATCCGACCGGAGGTATGG 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380210 CGCCAACGCTCGTGAAAACCCGGGTCGGTCGGTCCTCCATTCATCCGACCGGAGGTATGG 380269
Query: 463 ATAACGAGGCCACCTTCACAACCTTCTCCCTTCTGTCCCTATGTTGGAATAAGGTAAGGC 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380270 ATAACGAGGCCACCTTCACAACCTTCTCCCTTCTGTCCCTATGTTGGAATAAGGTAAGGC 380329
Query: 403 GGTTCGCTTGAGTTGCTCAACCGCCCCTTAGCCCGGTGCTCATGACGTGCTACGGAACCT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380330 GGTTCGCTTGAGTTGCTCAACCGCCCCTTAGCCCGGTGCTCATGACGTGCTACGGAACCT 380389
Query: 343 CCACCGTGCCGGGGGAGGGGGACCAAGCAGGGCATAGCTAGCGGCATAGGAGCCGACTCG 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380390 CCACCGTGCCGGGGGAGGGGGACCAAGCAGGGCATAGCTAGCGGCATAGGAGCCGACTCG 380449
Query: 283 GCATCAGCGGCTTCGTGCCGCACTGGAGTAATCCAATATGTGGTTCCGCGCGTTCCACCA 224
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380450 GCATCAGCGGCTTCGTGCCGCACTGGAGTAATCCAATATGTGGTTCCGCACGTTCCACCA 380509
Query: 223 CTTCTCCGTTCATTTCCAATACTGATCGTGAAACACCATGAGCAGCAGGATGTTGAGGTC 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380510 CTTCTCCGTTCATTTCCAATACTGATCGTGAAACACCATGAGCAGCAGGATGTTGAGGTC 380569
Query: 163 CGAAATTCGAAGTGAAATTTTGGATTTGCCTGTTCTTAGTCGTCATGGGAAAGAAATACA 104
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380570 CGAAATTCGAAGTGAAATTTTTGATTTGCCTGTTCTTAGTCGTCATGGGAAAGAAATACA 380629
Query: 103 GAAATAAGAAANA-NNNNTTCCCTTAGANNTTGNCCNATACCACCAGTACCNNAAATGCN 45
||||||||||| | |||||||||| ||| || |||||||||||||| ||||||
Sbjct: 380630 GAAATAAGAAAGAGATTATTCCCTTAGAGCTTGTCCAATACCACCAGTACCAGAAATGCA 380689
Query: 44 TCTCCTTCGCCCGCGCGANANANTTCTATGCCAGC 10
|||||||||||||||||| | | ||||||||||||
Sbjct: 380690 TCTCCTTCGCCCGCGCGAGAGACTTCTATGCCAGC 380724
Score = 55.9988 bits (28.0), Expect = 1.10161e-08
Identities = 37/40 (92%)
Strand = Plus/Plus
Query: 1672 CTGGATAGATGTGTGGGACAGAGGGCTCGTGGTACCTGCT 1711
|||| |||||| |||||||||||||||||| |||||||||
Sbjct: 153120 CTGGTTAGATGCGTGGGACAGAGGGCTCGTAGTACCTGCT 153159
Score = 50.0517 bits (25.0), Expect = 6.79629e-07
Identities = 25/25 (100%)
Strand = Plus/Minus
Query: 1312 CTGCCTCGCTGCGGGTCAGCACCTC 1288
|||||||||||||||||||||||||
Sbjct: 176729 CTGCCTCGCTGCGGGTCAGCACCTC 176753
Score = 46.087 bits (23.0), Expect = 1.06113e-05
Identities = 26/27 (96%)
Strand = Plus/Minus
Query: 902 CTTCCCCTTACTCCATAGGGCCTTCTC 876
|||||| ||||||||||||||||||||
Sbjct: 221901 CTTCCCTTTACTCCATAGGGCCTTCTC 221927
Score = 46.087 bits (23.0), Expect = 1.06113e-05
Identities = 29/31 (94%)
Strand = Plus/Plus
Query: 1000 CAGCGCTGCCTACACGCGAATTAGCTTCCGA 1030
||||||||||||| ||| |||||||||||||
Sbjct: 301095 CAGCGCTGCCTACGCGCTAATTAGCTTCCGA 301125
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597