BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig266
         (1013 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1285.1    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1285.06 bits (648.0), Expect = 0.0
Identities = 676/685 (99%)
Strand = Plus/Minus

Query: 1013   CGACGATAGTTCGTGGAGGTTTCTACAGAAAGACCCCNTGGNTTNTGGCAAACGGATCAC 954
              ||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||
Sbjct: 350737 CGACGATTGTTCGTGGAGGTTTCTACAGAAAGACCCCTTGG-TTCTGGCAAACGGATCAC 350795

Query: 953    AATTACAGGTACCTGGGAGCATACCGATGGAATGAACGAAATACGANCAGTTAACATAAT 894
              |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 350796 AATTACAGGTACCTGGGAGCATACCGATGGAATGAACGAAATACGAACAGTTAACATAAT 350855

Query: 893    ATGGTCATAGATCTTAGGTTGTAACTTGATCATGAGCGAATTTGTTGATGTTGCACCCAT 834
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350856 ATGGTCATAGATCTTAGGTTGTAACTTGATCATGAGCGAATTTGTTGATGTTGCACCCAT 350915

Query: 833    GAAGTATGGAAAGTGCCAAACATTGGGAACTACCCGGGGAGGAGTTAGGAACAGGAACAA 774
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350916 GAAGTATGGAAAGTGCCAAACATTGGGAACTACCCGGGGAGGAGTTAGGAACAGGAACAA 350975

Query: 773    GGAGAAGCGAGAACCACTTAAATGGAGGAATCGATTGTATTTCGTCCTTTGTTCCCCATA 714
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350976 GGAGAAGCGAGAACCACTTAAATGGAGGAATCGATTGTATTTCGTCCTTTGTTCCCCATA 351035

Query: 713    GCAACTGGGGATCAAAAAGCACCAAATTTGATGACTTATTAAGGGAAAGACGAAGTAAGA 654
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351036 GCAACTGGGGATCAAAAAGCACCAAATTTGATGACTTATTAAGGGAAAGACGAAGTAAGA 351095

Query: 653    GCATGCTATTGGAGACGTTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACGAAC 594
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351096 GCATGCTATTGGAGACGTTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACGAAC 351155

Query: 593    AAAATACGAATCCAAAGGCAGGGTAAGAAAGGGTTTAGCTAATGGAGATATTAACTCTTC 534
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351156 AAAATACGAATCCAAAGGCAGGGTAAGAAAGGGTTTAGCTAATGGAGATATTAACTCTTC 351215

Query: 533    CGGGAACCAGTAACGCGTAAACCATGTCAAACCAAGACCAATCAATACCCGAACGGAACG 474
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 351216 CGGGAACCAGTAACGCGTAAACCATGTCAAACCAAGACCAATCAATATCCGAACGGAACG 351275

Query: 473    GATTCGAACTTCTCCTAGAATAGTTTCCGGTGCGAAATGAAATTCATAGGATATATATGA 414
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351276 GATTCGAACTTCTCCTAGAATAGTTTCCGGTGCGAAATGAAATTCATAGGATATATATGA 351335

Query: 413    GTAATTCAAAGGAGAAATAGAAATATTTGATAGGATTCGATTCATTTTAGTAATGAACAA 354
              ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 351336 GTAATTCAAAGGATAAATATAAATATTTGATAGGATTCGATTCATTTTAGTAATGAACAA 351395

Query: 353    AACTAATAGGATTGATTATGTATCA 329
              ||| |||||||||||||||||||||
Sbjct: 351396 AACAAATAGGATTGATTATGTATCA 351421



Score = 190.799 bits (96.0), Expect = 1.57557e-49
Identities = 132/144 (92%)
Strand = Plus/Plus

Query: 112   AAAGCACCAAGCCCAATTGGAAATGCACCATCGCCGAGAGTTAGTTGAGTTATGGAAATC 171
             ||||||||||||  ||||||||||||| ||||||| ||||||||  ||| ||||||||||
Sbjct: 86128 AAAGCACCAAGCGAAATTGGAAATGCAACATCGCCTAGAGTTAGGAGAGGTATGGAAATC 86187

Query: 172   CCTTGAGAGAAGGAACGCTTTTCTAAGCGAAGAAAACGCCTCTCTAAGAGAAAAACTTTT 231
              ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 86188 TCTTGAGAGAAGGAACGCTTTTCTAAGCCAGGAAAACGCCTCTCTAAGAGAAAAACTTTT 86247

Query: 232   TCTTCTCGACAGGGAAGCCCCATA 255
               ||||||||||||||||||||||
Sbjct: 86248 AATTCTCGACAGGGAAGCCCCATA 86271



Score = 190.799 bits (96.0), Expect = 1.57557e-49
Identities = 132/144 (92%)
Strand = Plus/Plus

Query: 112    AAAGCACCAAGCCCAATTGGAAATGCACCATCGCCGAGAGTTAGTTGAGTTATGGAAATC 171
              ||||||||||||  ||||||||||||| ||||||| ||||||||  ||| ||||||||||
Sbjct: 287628 AAAGCACCAAGCGAAATTGGAAATGCAACATCGCCTAGAGTTAGGAGAGGTATGGAAATC 287687

Query: 172    CCTTGAGAGAAGGAACGCTTTTCTAAGCGAAGAAAACGCCTCTCTAAGAGAAAAACTTTT 231
               ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 287688 TCTTGAGAGAAGGAACGCTTTTCTAAGCCAGGAAAACGCCTCTCTAAGAGAAAAACTTTT 287747

Query: 232    TCTTCTCGACAGGGAAGCCCCATA 255
                ||||||||||||||||||||||
Sbjct: 287748 AATTCTCGACAGGGAAGCCCCATA 287771


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597