BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig262
         (1053 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1881.8    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1881.75 bits (949.0), Expect = 0.0
Identities = 1021/1051 (97%)
Strand = Plus/Minus

Query: 1053   CATTCACATTGGTTCATCCTGCTATGCCCTGGGCCTTTTGCTCTTCTAACGTAAAAGGTG 994
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362845 CATTCACATTGGTTCATCCTGCTATGCCCTGGGCCTTTTGCTCTTCTAACGTAAAAGGTG 362904

Query: 993    GCCGGCCATTCGTCAAGGCCCAGGAATCCGCTGGACATCTCAGCGGCGGGATTTGATACC 934
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362905 GCCGGCCATTCGTCAAGGCCCAGGAATCCGCTGGACATCTCAGCGGCGGGATTTGATACC 362964

Query: 933    CGCATCCGATCGAAGTTGCATTTTAGTGCTCCCTTAACATAAAGGGGGGCTTTTTCTAAG 874
              ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 362965 CGCATCCGATCGAAGTTGCATTTTAGTGCTCCCCTAACATAAAGGGGAGCTTTTTCTAAG 363024

Query: 873    TGGGTCGCTTCGCGCAAGACATTGCTTAGGACCAACGGGTCACACGACAGGTGCACGATC 814
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363025 TGGGTCGCTTCGCGCAAGACATTGCTTAGGACCAACGGGTCACACGACAGGTGCACGATC 363084

Query: 813    TACTTTGCGCGTTCCATCCTTCAGCCCTTCGCCTATCGGCTTGGCAGGCAAGCTACCTTG 754
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363085 TACTTTGCACGTTCCATCCTTCAGCCCTTCGCCTATCGGCTTGGCAGGCAAGCTACCTTG 363144

Query: 753    ATCCGTCTTCGGCTTCGATTCGTTACGCTCAGAAGCTCCAACAAGCCCTAAAGTCTCTTG 694
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363145 ATCCGTCTTCGGCTTCGATTCGTTACGCTCAGAAGCTCCAACAAGCCCTAAAGTCTCTTG 363204

Query: 693    CCGCCTAAAACTCTGCCAAGAGAGCGCTGCTTTACGTTTGATCCTATGTACCCATAGAAT 634
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363205 CCGCCTAAAACTCTGCCAAGAGAGCGCTGCTTTACGTTTGATCCTATGTACCCATAGAAT 363264

Query: 633    GCTATGCGTTCTCCACTTTCGGATCTCGCAAAGAGAGAACGTGTTTTTTCCTCTGACTTT 574
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363265 GCTATGCGTTCTCCACTTTCGGATCTCGCAAAGAGAGAACGTGTTTTTTCCTCTGACTTT 363324

Query: 573    CTCTCTCATTCGCGGAGCGAAGAAAGCGGGCTTTGCCCCAGCTACCGCTATCCTTGGGAA 514
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363325 CTCTCTCATTCGCGGAGCGAAGAAAGCGGGCTTTGCCCCAGCTACCGCTATCCTTGGGAA 363384

Query: 513    ACCAAAAGAGCTACCGAAGGAAAGGGATGCAGTCTCTCCTTTGGCCTTTGGAGAGGAGAG 454
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363385 ACCAAAAGAGCTACCGAAGGAAAGGGATGCAGTCTCTCCCTTGGCCTTTGGAGAGGAGAG 363444

Query: 453    GGCAGAGAAGAAAACGTCCTTCGCGCAAGNNNNNNNGCTTCCTGCGTCCTTACTAGTAAA 394
              |||||||||||||||||||||||||||||       ||||||||||||||||||||||||
Sbjct: 363445 GGCAGAGAAGAAAACGTCCTTCGCGCAAGTTTTTTTGCTTCCTGCGTCCTTACTAGTAAA 363504

Query: 393    AAAGGGGCTCTTCGACCAAGAAGGCATTCTGGTAGGAAGGCCGACCACTACATAAGTCGC 334
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363505 AAAGGGGCTCTTCGACCAAGAAGGCATTCTGGTAGGAAGGCCGACCACTACATAAGTCGC 363564

Query: 333    CATCCGTCCAGGAGAGAAGCAAGCTACCTTTCTTTGATCCCCCTTCCCGGGCAGGGAAGA 274
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363565 CATCCGTCCAGGAGAGAAGCAAGCTACCTTTCTTTGATCCCCCTTCCCGGGCAGGGAAGA 363624

Query: 273    GAACGAAAATGGACCGCAGAGGGTAGTCGTGGTTGATTTTGATTCGAGGATCTTACGCGG 214
              |||||||||||||||||||| |||||||||||      ||||||||||||||||||||||
Sbjct: 363625 GAACGAAAATGGACCGCAGATGGTAGTCGTGG------TTGATTCGAGGATCTTACGCGG 363678

Query: 213    CGGAGCGAACTCTTCTATCGTGTTGCATTTTCTCTGGCGGANNNNNNNNNNGGTCCATCG 154
              ||||||||||||||||||||| |||||||||||||||||||          |||||||||
Sbjct: 363679 CGGAGCGAACTCTTCTATCGTCTTGCATTTTCTCTGGCGGACCCCCCCCCCGGTCCATCG 363738

Query: 153    TACTGGAGCGATTCGAGAAGAACGATTAGGCGCATATTCTATCCTTTCTACAATGCCTAT 94
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 363739 TACTGGAGCGATTCGAGAAGAACGATTAGGCTCATATTCTATCCTTTCTACAATGCCTAT 363798

Query: 93     AGACGAAGTGCTTCGTTTCAGATCAATTCTTCGCTGCAATCGCTTCGATCCACCCCCTCG 34
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363799 AGACGAAGTGCTTCGTTTCAGATCAATTCTTCGCTGCAATCGCTTCGATCCACCCCCTCG 363858

Query: 33     GTGAAAAACCGTAATACGCCCTGAGGAATTC 3
              |||||||||||||||||||||||||||||||
Sbjct: 363859 GTGAAAAACCGTAATACGCCCTGAGGAATTC 363895



Score = 387.052 bits (195.0), Expect = 1.36909e-108
Identities = 221/233 (95%)
Strand = Plus/Minus

Query: 235    TTGATTCGAGGATCTTACGCGGCGGAGCGAACTCTTCTATCGTGTTGCATTTTCTCTGGC 176
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 132385 TTGATTCGAGGATCTTACGCGGCGGAGCGAACTCTTCTATCGTCTTGCATTTTCTCTGGC 132444

Query: 175    GGANNNNNNNNNNGGTCCATCGTACTGGAGCGATTCGAGAAGAACGATTAGGCGCATATT 116
              |||          |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 132445 GGACCCCCCCCCCGGTCCATCGTACTGGAGCGATTCGAGAAGAACGATTAGGCTCATATT 132504

Query: 115    CTATCCTTTCTACAATGCCTATAGACGAAGTGCTTCGTTTCAGATCAATTCTTCGCTGCA 56
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132505 CTATCCTTTCTACAATGCCTATAGACGAAGTGCTTCGTTTCAGATCAATTCTTCGCTGCA 132564

Query: 55     ATCGCTTCGATCCACCCCCTCGGTGAAAAACCGTAATACGCCCTGAGGAATTC 3
              |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132565 ATCGCTTCGATCCACCCCCTCGGTGAAAAACCGTAATACGCCCTGAGGAATTC 132617



Score = 42.1223 bits (21.0), Expect = 9.34524e-05
Identities = 24/25 (96%)
Strand = Plus/Plus

Query: 338    CTTATGTAGTGGTCGGCCTTCCTAC 362
              ||||||||||||||||| |||||||
Sbjct: 141792 CTTATGTAGTGGTCGGCATTCCTAC 141816



Score = 42.1223 bits (21.0), Expect = 9.34524e-05
Identities = 24/25 (96%)
Strand = Plus/Plus

Query: 338    CTTATGTAGTGGTCGGCCTTCCTAC 362
              |||||||||| ||||||||||||||
Sbjct: 200795 CTTATGTAGTCGTCGGCCTTCCTAC 200819


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597