BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig260
(1650 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1639.9 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1639.9 bits (827.0), Expect = 0.0
Identities = 873/888 (98%)
Strand = Plus/Minus
Query: 914 GAGGGGGCTTGGCTGGTACCAGGCTCTAAAAGAGTTTTCTTCGAGCGAGCGGTCTTTCTA 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127184 GAGGGGGCTTGGCTGGTACCAGGCTCTAAAAGAGTTTTCTTCGAGCGAGCGGTCTTTCTA 127243
Query: 854 TCTTTTTGGGTTGCATGCCCAAGGCAATGCTTTTTGTAGATTGAGATGGATTGATCTTCG 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127244 TCTTTTTGGGTTGCATGCCCAAGGCAATGCTTTTTGTAGATTGAGATGGATTGATCTTCG 127303
Query: 794 CTATCGTGCCTCCTCCTTGTACCAGTTGATGCTGGGGCAGTGCTTAATATGAGTTTTCTC 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127304 CTATCGTGCCTCCTCCTTGTACCAGTTGATGCTGGGGCAGTGCTTAATATGAGTTTTCTC 127363
Query: 734 CTGCCCCAGACAGCTTCGAGGTTCCCATCG----ATTACAGAGGTTTCTACCACTGAACT 679
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 127364 CTGCCCCAGACAGCTTCGAGGTTCCCATCGATCGATTACAGAGGTTTCTACCACTGAACT 127423
Query: 678 TGCTTATGCTCCCCTTTGATCGAGTGCTATTTCTATAAATAAGATTGAGTAGGAAAATGT 619
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 127424 TGCTTATGCTCCCCTTTGATCGAGTGCTATTTCTATAAAGAAGATTGAGTAGGAAAATGT 127483
Query: 618 TGAATTGGCTTCAATCGAGATTGCCTCGGCTTCTTAGGCACATGAGGAACCGGCCTAACA 559
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 127484 TGAATTGTCTTCAATCGAGATTGCCTCGGCTTCTTAGGCACATGAGGAAGCGGCCTAACA 127543
Query: 558 TCTTTTCAATCGAAATCCCAATCAAAGACAAGTTCTACCAAGGCCAGGATCTGAAAGAGA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127544 TCTTTTCAATCGAAATCCCAATCAAAGACAAGTTCTACCAAGGCCAGGATCTGAAAGAGA 127603
Query: 498 GGATTCACTTTCCGAAATTCCAAGTGACATGATTCCTCCTTCAGAAGCTAAAGTTGAATG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127604 GGATTCACTTTCCGAAATTCCAAGTGACATGATTCCTCCTTCAGAAGCTAAAGTTGAATG 127663
Query: 438 ATCGAAGTCTCCTTTAGGTTCAGTCGAAGAGATCGAAACGAAGTCATCAATTCAACCATT 379
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 127664 ATCGAAGTCTCCTTTAGGTTCAGTCGAAGAGATCGAAGCGAAGTCATCAATTCAACCATT 127723
Query: 378 CGAATGGTCTCCCCTAAGATTGACCTCTTTTCCAAATAAACCGAACCTCGATACCACATT 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127724 CGAATGGTCTCCCCTAAGATTGACCTCTTTTCCAAATAAACCGAACCTCGATACCACATT 127783
Query: 318 CATCAAAAAGATATGGCCATCTCTCTAGGTTGCACAACCCCTTTAGATCGTTCTATTCGT 259
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 127784 CATCAAAAAGATATGGCCATCTCTCTAGGTTGCACAACCCTTTTAGATCGTTCTATTCGT 127843
Query: 258 GCTTGAAAAACGACCCCATCGGTCCGCTCCTTTTAATGGACATTCTTAGCCGTCCTCCGA 199
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 127844 GCTTGAAAAACGACCCCAT-----CGCTCCTTTTAATGGACATTCTTAGCCGTCCTCCGA 127898
Query: 198 GGGTTAACACCCCATAGATCAGATCGTGAACTCTTTCAGACCCTTAGTTTCACTTGGTTG 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127899 GGGTTAACACCCCATAGATCAGATCGTGAACTCTTTCAGACCCTTAGTTTCACTTGGTTG 127958
Query: 138 GGGCAGAGTTTCAGCCTGCCTTCCACCGAATATAAAAAACCTTAGAGCTGCCTAACCTGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127959 GGGCAGAGTTTCAGCCTGCCTTCCACCGAATATAAAAAACCTTAGAGCTGCCTAACCTGC 128018
Query: 78 TGACATCCCGGCGAAGAGAGTCATTTTTTGTGTTACATCTTCGAATTC 31
||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 128019 TGACATCCCGGCGAAGAGAGTCATTATTTGTGTTACATCTTCGAATTC 128071
Score = 1237.48 bits (624.0), Expect = 0.0
Identities = 686/713 (96%)
Strand = Plus/Minus
Query: 1650 CCTAGTAAAGGGGCTTGGGGATAGAGGGTTTTCTGGGGGAGAGAAAGTTTCCAGGTTGGA 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126484 CCTAGTAAAGGGGCTTGGGGATAGAGGGTTTTCTGGGGGAGAGAAAGTTTCCAGGTTGGA 126543
Query: 1590 TTTTTGTAGATCAAATAGTACTAGTTGGGTAGATAGAGGTGGTGAAATCTAACCTTTGCA 1531
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126544 TTTTTTTAGATCAAATAGTACTAGTTGGGTAGATAGAGGTGGTGAAATCTAACCTTTGCA 126603
Query: 1530 TCGATCTTCTTTAGCAGGGCGGGTCGCTTGAGTGTCAAAACCAAGCCAAGCGGTGGTTGT 1471
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 126604 TCGATCTTCTTTAGCAGGGCGGGTCGCTTGAGTGTCAAAACCAAGC-----GGTGGTTGT 126658
Query: 1470 TTTTCCTTGGCTTATCGAACCAGCGTATGCCCATTCCTCCTTTGATGACTCCCAGTAGAG 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126659 TTTTCCTTGGCTTATCGAACCAGCGTATGCCCATTCCTCCTTTGATGACTCCCAGTAGAG 126718
Query: 1410 AAAGCCTCAATTTTCCGATGTGGATTGAAAGGAAGTTGGGGATGGACATAGACCCTTCCG 1351
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 126719 AAAGCCTAAATTTTCCGATGTGGATTGAAAGGAAGTTGGGGATGGACATAGATCCTTCCG 126778
Query: 1350 CCTATCCGGAGTGTTGGAAATATAGCAATGNNNNNNNNNNNNNNNNNNNCCCGATCATTG 1291
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 126779 CCTATCCGGAGTGTTGGAAATATAGCAATGTTTTTTGTATTTTTTATTTCCCGATCATTG 126838
Query: 1290 GAAGCAATCTTCACTGGCACAAGGATCTCCTCACAGCAACCTCCACTACGATAGAAACCG 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126839 GAAGCAATCTTCACTGGCACAAGGATCTCCTCACAGCAACCTCCACTACGATAGAAACCG 126898
Query: 1230 ACAATGAGTTTACGAAGGCTTCGAGTAGTGCGGGATAGGCTAATCACCAGACTGCTCTGG 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126899 ACAATGAGTTTACGAAGGCTTCGAGTAGTGCGGGATAGGCTAATCACCAGACTGCTCTGG 126958
Query: 1170 AATAGGTTAATCGCTGGAGACAAGAACGAGTGAATCTAGTTTCGAGAGCATGCCTTACTC 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126959 AATAGGTTAATCGCTGGAGACAAGAACGAGTGAATCTAGTTTCGAGAGCATGCCTTACTC 127018
Query: 1110 TAATAGGGGGCGTAGAGTTTCTAAGTGAAGGCAAGCGCAACTATATATGTAATATCCTAG 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127019 TAATAGGGGGCGTAGAGTTTCTAAGTGAAGGCAAGCGCAACTATATATGTAATATCCTAG 127078
Query: 1050 CTGTCAGCAAGGCAGGTCCGCTATAAAGCCTACCGGCCAGAAAGTCCTTAAGAACGAGAA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127079 CTGTCAGCAAGGCAGGTCCGCTATAAAGCCTACCGGCCAGAAAGTCCTTAAGAACGAGAA 127138
Query: 990 AGCCGACTAAAAGGCTATTCCATAACCGACTCTTGTTGCCGAGTCGAGGGGGC 938
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127139 AGCCGACTAAAAGGCTATTCCATAACCGACTCTTGTTGCCGAGTCGAGGGGGC 127196
Score = 59.9635 bits (30.0), Expect = 6.26267e-10
Identities = 33/34 (97%)
Strand = Plus/Plus
Query: 909 CCCCTCTCCTTACAGTCAAGTGGCTGAACGCCCC 942
|||||||||||| |||||||||||||||||||||
Sbjct: 213051 CCCCTCTCCTTAGAGTCAAGTGGCTGAACGCCCC 213084
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 66442 CCTCTCCTTACAGTCAAGTGGCT 66464
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 84281 CCTCTCCTTACAGTCAAGTGGCT 84303
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 128510 CCTCTCCTTACAGTCAAGTGGCT 128532
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 285781 CCTCTCCTTACAGTCAAGTGGCT 285803
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Minus
Query: 933 AGCCACTTGACTGTAAGGAGAGG 911
|||||||||||||||||||||||
Sbjct: 296947 AGCCACTTGACTGTAAGGAGAGG 296969
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 398915 CCTCTCCTTACAGTCAAGTGGCT 398937
Score = 46.087 bits (23.0), Expect = 9.41881e-06
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 911 CCTCTCCTTACAGTCAAGTGGCT 933
|||||||||||||||||||||||
Sbjct: 417192 CCTCTCCTTACAGTCAAGTGGCT 417214
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597