BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig259
         (1014 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1663.7    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1663.69 bits (839.0), Expect = 0.0
Identities = 949/993 (96%)
Strand = Plus/Plus

Query: 22    AAAGCTTTTTTNNTAGCATTGANNNNTACTTCAAAGNCTGGAAAGCTTNCNNCNCAGGTA 81
             ||||| |||||  |||||||||    |||||||||| ||||||||||| |  | ||||||
Sbjct: 39239 AAAGCATTTTTCCTAGCATTGAACCTTACTTCAAAGACTGGAAAGCTTACAACACAGGTA 39298

Query: 82    ATAGAGCGAAGCCTTAGGCTGATAAACTGATTGAAGGCAGACCAAGAGCATTACCTACGA 141
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 39299 ATAGAGCGAAGCCTTAGGCTGAGAAACTGATTGAAGGCAGACCAAGAGCATTACCTACGA 39358

Query: 142   GGATTTATTAGGATGGCTCAAAGACTTATTCGGTCTTTTCCTCAAAGGCGGATACGATTG 201
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 39359 GGATTTATTAGGATGGCTCAAAGACTGATTCGGTCTTTTCCTCAAAGGCGGATACGATTG 39418

Query: 202   AATTAGCTTTGGACTACGAGAGAGCTAGACAGCGGGGATGAAGGGTTTGCGAGGAAGAAT 261
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 39419 AATTAGCTTTGGACTACGAGAGAGCTAGACAGCGGGGATGAAAGGTTTGCGAGGAAGAAT 39478

Query: 262   CAATGGCCAATGGTTCTACAACTGCAACAGCACTTACTGAAAAGACTATTCTACGACCAG 321
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39479 CAATGGCCAATGGTTCTACAACTGCAACAGCACTTACTGAAAAGACTATTCTACGACCAG 39538

Query: 322   CCGCCTACTTAATTACACTTCCGGCATGGCATTAAGCAAGTTCCTTCTTCTGCGAATATG 381
             |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||
Sbjct: 39539 CCGCCTACTTAATTACACTTCCGGCAT-----TAAGCAAGTTCCTTCTTCTGCGAATATG 39593

Query: 382   AGATAGACCGACAGCCGGTACGGGACTAAGGGACTGTGGGAATAGCGATAGACCGGATTC 441
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 39594 AGATAGACCGACAGCCGGTACGGGACTAAGGGACTGTGGGAATAGCGAAAGACCGGATTC 39653

Query: 442   AAAGATATAGGCCAATCAAAACAAAAGGAAGATGGTGAAAGACCACCACAAAGAGACCCT 501
              |||||||||||||||||||     |||||||||||||||||||||||||||||||||||
Sbjct: 39654 CAAGATATAGGCCAATCAAA-----AGGAAGATGGTGAAAGACCACCACAAAGAGACCCT 39708

Query: 502   CGCTCACGCCTTAGTCTTATTCGAAAACAAAAGCGGATGGACCTTCCTCAAGAAAAAAGC 561
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 39709 CGCTCACGCCTTAGTCTTATTCGAAAACAAAAGCGGATGGGCCTTCCTCAAGAAAAAAGC 39768

Query: 562   CAATCTGATTTCGGGGGGCATGTAGGCGGAGAAAGGCTGGGAAACTATAAGGTCTCGTAG 621
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39769 CAATCTGATTTCGGGGGGCATGTAGGCGGAGAAAGGCTGGGAAACTATAAGGTCTCGTAG 39828

Query: 622   GAAAAAGACAAAACGTAGGTAGGCTGCCACGCGGAGTGAGGGTAACTAGCCAATTCCCCA 681
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 39829 GAAAAAGACAAAACGTAGGTAGGCTGCCACGCGGAGTGAAGGTAACTAGCCAATTCCCCA 39888

Query: 682   AGGTCTAGTAAACTAAGGTGGTAGTGCAGACAAGGTTAATTCACTCTGGGATTGGTAGTC 741
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39889 AGGTCTAGTAAACTAAGGTGGTAGTGCAGACAAGGTTAATTCACTCTGGGATTGGTAGTC 39948

Query: 742   CCGTCTGCTCTGACGTCGGAATAATCATTATAATACGATGATAGCACCTGATTAGCAAGA 801
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39949 CCGTCTGCTCTGACGTCGGAATAATCATTATAATACGATGATAGCACCTGATTAGCAAGA 40008

Query: 802   AATTCCCAGCTCTCCTCTTAGCAATGATCTGTCTAGGGCTACTTTCTAAACTGCGGATTC 861
             ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 40009 AATTCCCTGCTCTCCTCTTAGCAATGATCTGTCTAGGGCTACTTTCAAAACAGCGGATTC 40068

Query: 862   TGTAATAAGACCCTATTCATGGGCATTCTCCGACTTAGAATCGAATTCATACCCGGCAAT 921
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40069 TGTAATAAGACCCTATTCATGGGCATTCTCCGACTTAGAATCGAATTCATACCCGGCAAT 40128

Query: 922   CTACGATCTACCCAGCGCCTTAGTCTATGTTGAATNNNCATACCCNACTTCCAGCTNNTT 981
             |||||||||||||||||||||||| ||||||||||   ||||||| ||||||||||  ||
Sbjct: 40129 CTACGATCTACCCAGCGCCTTAGTTTATGTTGAATAGGCATACCCGACTTCCAGCTAATT 40188

Query: 982   GTCNNATAAAGCTATCCGTGCNTNAATTNCTAG 1014
             |||  |||||||||||||||| | |||| ||||
Sbjct: 40189 GTCAAATAAAGCTATCCGTGCTTTAATTCCTAG 40231


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597