BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig255
         (963 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1681.5    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1681.53 bits (848.0), Expect = 0.0
Identities = 911/937 (97%)
Strand = Plus/Plus

Query: 19     GAATTCCTACGGCGGTTTTGTCAACGAACGCGTCTCGGGCCGGATTGACTAACCTAACCC 78
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358307 GAATTCCTACGGCGGTTTTGTCAACGAACGCGTCTCGGGCCGGATTGACTAACCTAACCC 358366

Query: 79     ACCCTTAAGGAGGCTTTTCCATAGTTGGGTGTCCGCTTTAGTGTGATTTACGAAGGCTAG 138
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358367 ACCCTTAAGGAGGCTTTTCCATAGTTGGGTGTCCGCTTTAGTGTGATTTACGAAGGCTAG 358426

Query: 139    GCTAGGTTTGGTAATATCCAAAACAAATGAAAAGAGATCGGGGTCGATAGGTGGCAGTTG 198
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 358427 GCTAGGTTTGGTAATATCCAAAACAAATGAAAAGAGGTCGGGGTCGATAGGTGGCAGTTG 358486

Query: 199    GCAAGGAACTTGATNNNNNNNNNNNNNNGGGGGAAGCCGCGGTCGAACTCAAATTCTGGA 258
              ||||||||||||||              ||||||||||||||||||||||  ||||||||
Sbjct: 358487 GCAAGGAACTTGATCCCCCCCAAAAAAAGGGGGAAGCCGCGGTCGAACTCTTATTCTGGA 358546

Query: 259    AATAAGTCGGGGCCCTTTTACCAAGTCTACCAGATAGAAGATGATAGAGGGCCAACTATC 318
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358547 AATAAGTCGGGGCCCTTTTACCAAGTCTACCAGATAGAAGATGATAGAGGGCCAACTATC 358606

Query: 319    GTTGCCTTGCACAAGACGGTGCCCTTTCACTTCGAGTTCCTTCCTTCGTAGTCAAATCTG 378
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358607 GTTGCCTTGCACAAGACGGTGCCCTTTCACTTCGAGTTCCTTCCTTCGTAGTCAAATCTG 358666

Query: 379    ATGATACGCTTTGGCGATGTTACCTACCAAATAAAAGGCCTGCTAGGTGATCGAAATCGC 438
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358667 ATGATACGCTTTGGCGATGTTACCTACCAAATAAAAGGCCTGCTAGGTGATCGAAATCGC 358726

Query: 439    TCAGGTCAGTGAGGACTCACTCACTCATCTACTCCTTATCTATTTAATACTTTCTTCTAT 498
              ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 358727 TCAGGTCAGTGAGGACTCACTCACTCACCTACTCCTTATCTATTTAAGACTTTCTTCTAT 358786

Query: 499    CTACTTAATTAATTTAAAAGGCGACCCGCCGCGCCGGGCTATAAGATAAGATACAGTTCT 558
              ||||||||    ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 358787 CTACTTAA----TTTAAAAGGCGACCCGCCGCGCCGGGCTATAAGATAAGATAGAGTTCT 358842

Query: 559    TGTACTACTTGATTGACTGGTAAGAAAGAGCTTCCGTAAGAACTGGAAGACTCTTGTATG 618
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358843 TGTACTACTTGATTGACTGGTAAGAAAGAGCTTCCGTAAGAACTGGAAGACTCTTGTATG 358902

Query: 619    TACGGTAACCCTCTCTTCCGCTACTGGTGGACTGTTGCACAGAAAGGGCGACAGAAGCAA 678
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358903 TACGGTAACCCTCTCTTCCGCTACTGGTGGACTGTTGCACAGAAAGGGCGACAGAAGCAA 358962

Query: 679    CCTTTCTTAGCGCGCTTTTCAAGCGCTTAGCTTCTGCTAGTGGCGGGGCGGCAAGGCCAT 738
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358963 CCTTTCTTAGCGCGCTTTTCAAGCGCTTAGCTTCTGCTAGTGGCGGGGCGGCAAGGCCAT 359022

Query: 739    GTTGTTCAGTTGGAAGCCTAAGCCAAGAAGGTACGAACGAAGTGACGGGCCCCTTTAGAA 798
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359023 GTTGTTCAGTTGGAAGCCTAAGCCAAGAAGGTACGAACGAAGTGACGGGCCCCTTTAGAA 359082

Query: 799    GATAGGGGGCGGCTTTCTTGTGGTAGTAATTGCGAACATCTCTCCTCTTCTCTTAGCGTG 858
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359083 GATAGGGGGCGGCTTTCTTGTGGTAGTAATTGCGAACATCTCTCCTCTTCTCTTAGCGTG 359142

Query: 859    CACAGTTTGCTTACATGCCGCCTTAGGCACATCTCTCTTTCTTAGTTTCACGCTGGACTA 918
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359143 CACAGTTTGCTTACATGCCGCCTTAGGCACATCTCTCTTTCTTAGTTTCACGCTGGACTA 359202

Query: 919    ATGATAATGAATGAAAGTCAGTCTTTTANNAAACGTA 955
              ||||||||||||||||||||||||||||  |||||||
Sbjct: 359203 ATGATAATGAATGAAAGTCAGTCTTTTAGTAAACGTA 359243


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597