BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig253
(857 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1471.4 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1471.4 bits (742.0), Expect = 0.0
Identities = 827/857 (96%)
Strand = Plus/Plus
Query: 1 TAGGGAACTTTCATTCCCAGTAGAAGTCCTCGAGCAACTTGACTAATACTAATAAATAAG 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 271739 TAGGGAACTTTCATTCCCAGTAGAAGTCCTCGAGCAACTTGCCTAATACTAATAAATAAG 271798
Query: 61 GGGAAGGCCCAACATTTTCTATTAGTATAAGGAAGGCGCTAGCTAGCGCCCAACCTATAC 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 271799 GGGAAGGCCCAACATTTTATATTAGTATAAGGAAGGCGCTAGCTAGCGCCCAACCTATAC 271858
Query: 121 AAGGGCTTTCCACCTCCATTTGGTCGTGCTGCTATGATGTAACGTGCAGTCGTCCCAAGG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271859 AAGGGCTTTCCACCTCCATTTGGTCGTGCTGCTATGATGTAACGTGCAGTCGTCCCAAGG 271918
Query: 181 CAGCAGGATGTATGGTATAGGGCCCCCTATTTTATCTCCCTTAAAGTCCTTTATGGATTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271919 CAGCAGGATGTATGGTATAGGGCCCCCTATTTTATCTCCCTTAAAGTCCTTTATGGATTT 271978
Query: 241 CGAGTCGGGAATAGAGCTGTGGCTTATTCGGCGCTATATCACAATGCATTCTCGGGCATA 300
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271979 CGAGTCGGGAATAGAGCAGTGGCTTATTCGGCGCTATATCACAATTCATTCTCGGGCATA 272038
Query: 301 GCTGTTCACGAAAGGTGGCATGGGACATCTGTCAGCGGCGGGAGTCTTACATCCGAGCGA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272039 GCTGTTCACGAAAGGTGGCATGGGACATCTGTCAGCGGCGGGAGTCTTACATCCGAGCGA 272098
Query: 361 GAGGTCAGACCAATCCCATTCATCCTGGTCTGATCCGAACAGATCTTGTTGAATGAATTG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272099 GAGGTCAGACCAATCCCATTCATCCTGGTCTGATCCGAACAGATCTTGTTGAATGAATTG 272158
Query: 421 ATCCATTCCATTGTTGTATGCCCTACTTCTTAATCAATTTATTCCTACTCGGACCCGCCG 480
| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 272159 A-----TCCATTGTTGTATGCCCTACTTCTTAGTAAATTTCTTCCTACTCGGACCCGCCG 272213
Query: 481 TACTTCCTTTGACTACTCCTGAGATATAGTGGAAAGANNNNNNNATGGTGGAGAGTGGGG 540
||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 272214 TACTTCCTTTGACTACTCCTGAGATATAGTGGAAACATTTTGTTATGGTGGAGAGTGGGG 272273
Query: 541 AGTGAAAAGACCAATGCAGCAGAGAANGGACTGCATGAATCGGAATCCGCTTATTAAGAT 600
|||||||||||||||||||||||||| |||||||||||||||||||| ||| ||
Sbjct: 272274 AGTGAAAAGACCAATGCAGCAGAGAAC-GACTGCATGAATCGGAATCCACTT------AT 272326
Query: 601 TAAGACAGACGACCGAGAAAGAAAGGCTCCGCGTTCGAACATTGGTTGATCTTAGCTTAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272327 TAAGACAGACGACCGAGAAAGAAAGGCTCCGCGTTCGAACATTGGTTGATCTTAGCTTAG 272386
Query: 661 CGTGCTAGCCGCTGCTTCATTTCGTATAGTGATAACGCTTTCTCTTTCTTAACGCTCCGC 720
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 272387 CGTGCTAGCCGCTGCTTCATTTCGTATAGTGATAACGCTTTCTCTTTCTTAGCGCTCCGC 272446
Query: 721 CCCCCTTGTATAGTAAGGGCTACTTTGGTTGCGCGGCTTTCTCTTATAGGGTGACTTGAC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272447 CCCCCTTGTATAGTAAGGGCTACTTTGGTTGCGCGGCTTTCTCTTATAGGGTGACTTGAC 272506
Query: 781 TCAGCTTGACCTACTTGACTCAGCGGTTAGAGTATCGCTTTCATACGGCGAGAGTCATTG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272507 TCAGCTTGACCTACTTGACTCAGCGGTTAGAGTATCGCTTTCATACGGCGAGAGTCATTG 272566
Query: 841 GTTCAAATCCAATAGTA 857
|||||||||||||||||
Sbjct: 272567 GTTCAAATCCAATAGTA 272595
Score = 87.7165 bits (44.0), Expect = 1.42757e-18
Identities = 50/52 (96%)
Strand = Plus/Minus
Query: 266 TAAGCCACAGCTCTATTCCCGACTCGAAATCCATAAAGGACTTTAAGGGAGA 215
|||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 403291 TAAGCCACAGCTCTATTCCCGACTAGAAATCTATAAAGGACTTTAAGGGAGA 403342
Score = 55.9988 bits (28.0), Expect = 5.04158e-09
Identities = 28/28 (100%)
Strand = Plus/Plus
Query: 102 GCTAGCGCCCAACCTATACAAGGGCTTT 129
||||||||||||||||||||||||||||
Sbjct: 200114 GCTAGCGCCCAACCTATACAAGGGCTTT 200141
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597