BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig251
         (980 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1532.8    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1532.85 bits (773.0), Expect = 0.0
Identities = 848/878 (97%)
Strand = Plus/Minus

Query: 906   TCACTATGGTATCTNCTACTACAGGTATGGCGCTAGCTAAGCTTGTGATTACTGTAGCTC 847
             |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 41543 TCACTATGGTATCTCCTACTACAGGTATGGCGCTAGCTAAGCTTGTAATTACTGTAGCTC 41602

Query: 846   CCCAAAAGCTCATCTGACCCCAAGGTAGTACATATCCTATAAAAGCTGTCACAATCATTA 787
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41603 CCCAAAAGCTCATCTGACCCCAAGGTAGTACATATCCTATAAAAGCTGTCACAATCATTA 41662

Query: 786   ATAGGAAGATTACAACTCCGAGACACCGAACAAATTCCCTAGGACTGCTATAACTGGCAT 727
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41663 ATAGGAAGATTACAACTCCGAGACACCGAACAAATTCCCTAGGACTGCTATAACTGGCAT 41722

Query: 726   GATATAGACCACGAAAAATATGCAGGTGAACCACAATGAAAAACATACTTGCCCCATTAG 667
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 41723 GATATAGACCACGAAAAATATGAAGGTGAACCACAATGAAAAACATACTTGCCCCATTAG 41782

Query: 666   CATGCATATAACGGAGCAACCAGCCCCCTTCAACATCTCTCATAATGTGTTCTACGCTGT 607
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41783 CATGCATATAACGGAGCAACCAGCCCCCTTCAACATCTCTCATAATGTGTTCTACGCTGT 41842

Query: 606   TGAAAGCTAGATCCACATGAGGTGTGTAATGCATAGCTNNNNNNNCGCCAGTCACTATCT 547
             ||||||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 41843 TGAAAGCTAGATCCACATGAGGTGTGTAATGCATAGCTAAAAAAACGCCAGTCACTATCT 41902

Query: 546   GAATGACTAAACAAATACCCGCTAACGAACCGAACCCCCACCAATAACTAAGATTGCTCG 487
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 41903 GAATGACTAAACAAATACCAGCTAACGAACCGAACCCCCACCAATAACTAAGATTGCTCG 41962

Query: 486   GGGTTGGATAATCTATCAAATGCTGATTAAGTGTGGAGGATATAGGTTGTTTAAGAAGAG 427
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41963 GGGTTGGATAATCTATCAAATGCTGATTAAGTGTGGAGGATATAGGTTGTTTAAGAAGAG 42022

Query: 426   AGAGCCGTTGGTTCCTTATAGTCATTTCNNNNNNNCTCTTTTCTATCGTGACAACTCTTG 367
             |||| ||||||||||||||||||||||         |||||||||||||||||||||| |
Sbjct: 42023 AGAGTCGTTGGTTCCTTATAGTCATTTATTTATTTATCTTTTCTATCGTGACAACTCTAG 42082

Query: 366   TTCCCCCACCTTTTAGCGTTCTGGGGCCCTACTATGTATTAAAATGTGAGTACCCTTTCT 307
             |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||
Sbjct: 42083 TTCCCCCACCTTTTAGCGTTCTGGGGCCCTACTATGTATTCAAATTAGAGTACCCTTTCT 42142

Query: 306   TCCACCTCCGAAGGATGGAGGGGGTATACAGCGAAAAAAGCGTCGAAGGGGTCGGATCAC 247
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42143 TCCACTTCCGAAGGATGGAGGGGGTATACAGCGAAAAAAGCGTCGAAGGGGTCGGATCAC 42202

Query: 246   CCTGGGTTACTGAAGAGTCGTCCGACTTCTCGGTGACCGAATAAGAGAGGTTTTTACCGC 187
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42203 CCTGGGTTACTGAAGAGTCGTCCGACTTCTCGGTGACCGAATAAGAGAGGTTTTTACCGC 42262

Query: 186   TTTCTCTTCTCTCCAGCACTCTCGGACTGATCATCTTGCTGCAACAAAGCAAGCTTAGGA 127
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42263 TTTCTCTTCTCTCCAGCACTCTCGGACTGATCATCTTGCTGCAACAAAGCAAGCTTAGGA 42322

Query: 126   ATGAATCTAATGGAAATTTAGGTCTCTGTCCGCTTGGAAGATTATTCTTTCCTCCTCGGC 67
             |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| 
Sbjct: 42323 ATGAATCTAATGGAAATTTTTGTCTCTGTCCGCTTGGAAGATTATTCTTTCCTCCTCGGT 42382

Query: 66    GAAAGAGGGCAAAAAGGGTGTGTGGGAGAAAGAATTCT 29
             ||||||||||||||| ||||||||||||||||||||||
Sbjct: 42383 GAAAGAGGGCAAAAAAGGTGTGTGGGAGAAAGAATTCT 42420


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597