BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig246
(1016 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 757.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 757.752 bits (382.0), Expect = 0.0
Identities = 394/398 (99%)
Strand = Plus/Minus
Query: 416 GAAATGCCATAACTCTCTTTCTGAATGTCTCGACTTTCTTTCTCAAACCACCGGACAGGG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36925 GAAATGCCATAACTCTCTTTCTGAATGTCTCGACTTTCTTTCTCAAACCACCGGACAGGG 36984
Query: 356 GTGCGGAAATAGCAACAATTCATGGTAGAGCGGAAATTGCTTCTGATTTGATTTCGCCTG 297
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 36985 GTGCGGAAATAGCAACAATTAATGGTAGAGCGGAAATTGCTTCTGATTTGATTTCGCCTG 37044
Query: 296 AAACGAATCCCTCGCTTTGATAAGAAATATCTGAGTAAACAACCTTTGAGCTGAGGTAAT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37045 AAACGAATCCCTCGCTTTGATAAGAAATATCTGAGTAAACAACCTTTGAGCTGAGGTAAT 37104
Query: 236 ATTCAATTTTGAGGGTTAGCTTTGCGTTCCTTGAGTATGTTTCTGCCCTAAACTAAGAAA 177
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37105 ATTCCATTTTTAGGGTTAGCTTTGCGTTCCTTGAGTATGTTTCTGCCCTAAACTAAGAAA 37164
Query: 176 GAGTATAGTGCTCGTTTTGATAAGAGTATTACATACTATCTGCTGGAATGTTTTCAACGT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37165 GAGTATAGTGCTCGTTTTGATAAGAGTATTACATACTATCTGCTGGAATGTTTTCAACGT 37224
Query: 116 CCCCCTTATGCAACTACGGGAATTTCTTCTGGTTCGCTACTATCTTTTCCTACAGCTCAC 57
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37225 CCCCCTTATGCAACTACGGGAATTTCTTCTGGTTCGCTACTATCTTTTCCTACAGCTCAC 37284
Query: 56 GGCTGACCTTGAACTGGCCAAAAAGCTTTCTATTTGAA 19
| ||||||||||||||||||||||||||||||||||||
Sbjct: 37285 GACTGACCTTGAACTGGCCAAAAAGCTTTCTATTTGAA 37322
Score = 305.775 bits (154.0), Expect = 3.86683e-84
Identities = 182/191 (95%)
Strand = Plus/Minus
Query: 830 CCCCTTCGACTGAACGACGGAATTCTTTCACCGCGCTCTACTTCCTTAGGGGGATGAGAA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36742 CCCCTTCGACTGAACGACGGAATTCTTTCACCGCGCTCTACTTCCTTAGGGGGATGAGAA 36801
Query: 770 GG----CCAGTCCTCTCTCCTTCGGGCCCTTCTTTTCGATAAGGGGAGGCTATTCTTGAA 715
|| ||||| || ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 36802 GGATGGCCAGTTCTGTCTTCTTCGGACCCTTCTTTTCGATAAGGGGAGGCTATTCTTGAA 36861
Query: 714 AAGAATAGGTATGTTCAACTAGTTATTTGAACTATTCAATAAGAATAGGGATTTTCAATG 655
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36862 AAGAATAGGTATATTCAACTAGTTATTTGAACTATTCAATAAGAATAGGGATTTTCAATG 36921
Query: 654 CTAGAAATGCC 644
|||||||||||
Sbjct: 36922 CTAGAAATGCC 36932
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597