BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig245
(1973 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1574.5 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1574.48 bits (794.0), Expect = 0.0
Identities = 809/814 (99%)
Strand = Plus/Plus
Query: 1160 CTCACGATGTGGATTCGAACCACTGCTTCTCCTTATTGTCGTGAGCGGGTCTGTCGTCCT 1219
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 312816 CTCACGATGTGGATTCGAACCACTGCTTCTCCTTATTGTCGTGAGTGGGTCTGTCGTCCT 312875
Query: 1220 CCTCATTATAGTCCTCCTAGAATCCAGAGCATTTCGTCGAAATACATCCTGTCTTTTCAC 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312876 CCTCATTATAGTCCTCCTAGAATCCAGAGCATTTCGTCGAAATACATCCTGTCTTTTCAC 312935
Query: 1280 CTTAGTAGTCCTATGCATAGTCAGTACTATAGCCCCAATCATGGCTACTAATAAAATAAG 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312936 CTTAGTAGTCCTATGCATAGTCAGTACTATAGCCCCAATCATGGCTACTAATAAAATAAG 312995
Query: 1340 ACTAGAAACCAAAAACCAGACGAAATAGTAGGTATAAAGTAAATTGCCCAATGTTTCCAA 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312996 ACTAGAAACCAAAAACCAGACGAAATAGTAGGTATAAAGTAAATTGCCCAATGTTTCCAA 313055
Query: 1400 ATTAGTCCAACTTCGTACCTTTCCGGCATAAACCGTATATCTCAGAGAGGTCGTATTTCT 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313056 ATTAGTCCAACTTCGTACCTTTCCGGCATAAACCGTATATCTCAGAGAGGTCGTATTTCT 313115
Query: 1460 TTGGGTTGGTAGTAATGGAATGCTTTCATTATCTAAAATAAAGAACATCTCCCACCAAAA 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313116 TTGGGTTGGTAGTAATGGAATGCTTTCATTATCTAAAATAAAGAACATCTCCCACCAAAA 313175
Query: 1520 GATAAGTCCAATAATACCACTCACTGGTAAATAGCGCAATACTTCTTCGTGAATCTCCGC 1579
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 313176 GAGCAGTCCAATAATACCACTCACAGGTAAATAGCGCAATACTTCTTCGTGAATCTCCGC 313235
Query: 1580 TATTTGAATATGGAACATCATAACAACGAATAGGAATGAAACGGCTATAGCTCCTATATA 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313236 TATTTGAATATGGAACATCATAACAACGAATAGGAATGAAACGGCTATAGCTCCTATATA 313295
Query: 1640 AACTACTGGGAAGATCATAGCGAAGAAGTCGAGACCTAACAAAAGAAGTAAACCTGAAGT 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313296 AACTACTGGGAAGATCATAGCGAAGAAGTCGAGACCTAACAAAAGAAGTAAACCTGAAGT 313355
Query: 1700 GTTGCGAAAGACTGGGATGAGAAACAAAACGGAATGTACCGGATTTTTAGCACGTACAAC 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313356 GTTGCGAAAGACTGGGATGAGAAACAAAACGGAATGTACCGGATTTTTAGCACGTACAAC 313415
Query: 1760 CATCAAACCAGAGACCAAAGCAGGGCTCGACAAAACGGAAAGTATCATAGTACGTCGTCC 1819
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 313416 CATCAAACCAGAGACCAAAGCAGGGCTCGACAAAACAGAAAGTATCATAGTACGTCGTCC 313475
Query: 1820 TTCCCTGAAATGGAACTTTCATGCTGGAGCAAGAACTAGCATGAAAGTCGATCTATTACG 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313476 TTCCCTGAAATGGAACTTTCATGCTGGAGCAAGAACTAGCATGAAAGTCGATCTATTACG 313535
Query: 1880 ACCAGCGCGGTTGTTCCTATTTCATTTTCTTCTTCCAAGCCCTTCTTAGAAAGCACTCAC 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313536 ACCAGCGCGGTTGTTCCTATTTCATTTTCTTCTTCCAAGCCCTTCTTAGAAAGCACTCAC 313595
Query: 1940 TGAGTTACTTACGGAATCTCAAATCTCTCTCGAC 1973
||||||||||||||||||||||||||||||||||
Sbjct: 313596 TGAGTTACTTACGGAATCTCAAATCTCTCTCGAC 313629
Score = 71.8576 bits (36.0), Expect = 1.97045e-13
Identities = 42/44 (95%)
Strand = Plus/Minus
Query: 1923 AAGGGCTTGGAAGAAGAAAATGAAATAGGAACAACCGCGCTGGT 1880
|||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 48474 AAGGACTTGGAAGAAGAAAATGAAATAGGAACAAGCGCGCTGGT 48517
Score = 48.0694 bits (24.0), Expect = 2.85458e-06
Identities = 33/36 (92%)
Strand = Plus/Minus
Query: 1826 CAGGGAAGGACGACGTACTATGATACTTTCCGTTTT 1791
|||| |||||||||||||||||| |||||| |||||
Sbjct: 364128 CAGGAAAGGACGACGTACTATGAGACTTTCTGTTTT 364163
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597