BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig242
(1646 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 2833.3 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 2833.28 bits (1429.0), Expect = 0.0
Identities = 1563/1608 (97%)
Strand = Plus/Minus
Query: 1646 TCTAAATAATAGGAATTCAGGTATGGCAGGAATACTGTCGACCATTACGAGCGATAGCGA 1587
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 158706 TCTAAATAATTGGAATTCTGGTATGGCAGGAATACTGTCGACCATTACGAGCGATAGCGA 158765
Query: 1586 AGCCAAGCCGTATAAAGGCGAGCAGCCCTTATAGCAATAGCAAACGGCCTACTTATAGCC 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158766 AGCCAAGCCGTATAAAGGCGAGCAGCCCTTATAGCAATAGCAAACGGCCTACTTATAGCC 158825
Query: 1526 TATCAACAGGTCAGTCAATATCAGTAGGGGTCCTCTTGCCTNNNNNNNGGAGTCAGCCCA 1467
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 158826 TATCAACAGGTCAGTCAATATCAGTAGGGGTCCTCTTGCCTAAC----GGAGTCAGCCCA 158881
Query: 1466 ACATGGGCAATGATAGACAGACCAAAGATTTACGCAGTCCTTGTGTGCTTGCTTTGTGCA 1407
|||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 158882 ACATGGACAATGATAGGCAGACCAAAGATTTACGCAGTCGTTGCGTGCTTGCTTTGCGCA 158941
Query: 1406 CCGGCATAGCAGAATTCGAATCCGCTGGCTCAGATGAGTGGCTCTTGGCTTCGTAAACAT 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158942 CCGGCATAGCAGAATTCGAATCCGCTGGCTCAGATGAGTGGCTCTTGGCTTCGTAAACAT 159001
Query: 1346 ATCTATGTTCTTGCTTTTTCACTACCAATGAGTAGGCAGCTTTGGATGCTTATGGAGATA 1287
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159002 ATCTATGTTGTTGCTTTTTCACTACCAATGAGTAGGCAGCTTTGGATGCTTATGGAGATA 159061
Query: 1286 TGGCTTTGGTAAAGATCTGCTTAGCGTGTGCTTTCTCGGGTGCTACTTAGAATAGAGATA 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159062 TGGCTTTGGTAAAGATCTGCTTAGCGTGTGCTTTCTCGGGTGCTACTTAGAATAGAGATA 159121
Query: 1226 GTAAGACTCTAACTTGAGAATGTTATAGCGCTGTGAAATAAGGACATTCTGATCGACCCG 1167
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159122 GTCAGACTCTAACTTGAGAATGTTATAGCGCTGTGAAATAAGGACATTCTGATCGACCCG 159181
Query: 1166 ATTGGCTCTCGTTCTGGTTTGGCGGAAAGGGGAAAAGCACTAAATCTTTCTTCCTGGTTG 1107
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 159182 ATTGGCTCTCGTTCTGGTTTGGCGGAAAGGTGAAAAGCACTAAATCTTTCTTCCTGGTTG 159241
Query: 1106 GTGTACTAGGGCGAGGCGAATCCCAACCCTTTCGTTAGCTAGCTTAGCTTTCCCTCTTTT 1047
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 159242 GTGTACTAGGGCGAGGCGAATCCCAACCCCTTCGTTAGCTAGCTTAGCTTTCCCTCTTTT 159301
Query: 1046 CAATCTATATCAGATCCTCCATTACTTCTTCGCCAATACCTTTTAGCTTTCCTTTAGCTG 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159302 CAATCTATATCAGATCCTCCATTACTTCTTCGCCAATACCTTTTAGCTTTCCTTTAGCTG 159361
Query: 986 CTACTTTTTCCCAGTCCACGCCCAATC----TAGTCAGTGTGCCTGCTCCGTCCTTCTTT 931
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 159362 CTACTTTTTCCCAGTCCACGCCCAATCAGAGTAGTCAGTGTGCCTGCTCCGTCCTTCTTT 159421
Query: 930 GACGAAATGGATGCTGTAGGAGAGGTTGGGAAGGAGGGACTTCGCTAAAGATGGTCTGTC 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159422 GACGAAATGGATGCTGTAGGAGAGGTTGGGAAGGAGGGACTTCGCTAAAGATGGTCTGTC 159481
Query: 870 TGTGCGCGAGGAAGGTCTTTTTCCTTTCTCCTTCCATTGCTTGACTAGGTTCGCTTTGCA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159482 TGTGCGCGAGGAAGGTCTTTTTCCTTTCTCCTTCCATTGCTTGACTAGGTTCGCTTTGCA 159541
Query: 810 AGGAAGGGAAGGCATCCGTGCAGGTAGAAAAGGGCGGAGGTCAAGCTATGGGCACAAGGA 751
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 159542 AGGAAGGGAAGGCATCCGTGCAGGTAGAAAAAGGCGGAGGTCAAGCTATGGGCACAAGGA 159601
Query: 750 GGTAAGGTATAGTAAGTTACTTCTTCGTCTTTTGCTTGTCATTGGATTGGAAGCCGCAGG 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159602 GGTAAGGTATAGTAAGTTACTTCTTCGTCTTTTGCTTGTCATTGGATTGGAAGCCGCAGG 159661
Query: 690 CGATGCCTTCTTGCTTGTGTAGTTGGCCTTGCCTGCTTAGTGCGGAAGTGCGTAAAGTAG 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159662 CGATGCCTTCTTGCTTGTGTAGTTGGCCTTGCCTGCTTAGTGCGGAAGTGCGTAAAGTAG 159721
Query: 630 GCTCATTCTTTGGTTTATAAAGATCTTGTAGTAGCCGAAGGTAGTCCGCTTGTTAGATTG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159722 GCTCATTCTTTGGTTTATAAAGATCTTGTAGTAGCCGAAGGTAGTCCGCTTGTTAGATTG 159781
Query: 570 AATTTCATCTTATATAACAACACAACCGGGGCCTTATTTTATTAATTTAGAGACTTTATC 511
|||| |||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 159782 AATTGAATCTTATATA-----ACAACCGGGGCC-----TTATTAATTAAGAGACTTTATC 159831
Query: 510 AATAGTATAAGTGGACCTCTCAAAGGTATAAGTAGACATTAGTCTTGCTGGTTCGGGCGG 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159832 AATAGTATAAGTGGACCTCTCAAAGGTATAAGTAGACATTAGTCTTGCTGGTTCGGGCGG 159891
Query: 450 TAAGGCCCTGGGTAAGCTCGGGTTAGCCTGTCAGGGTGAATGCAGGTAGTGGATGTAGCT 391
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 159892 TAAGGCCCTGGGTAAGCTCGGGGTAGCCTGTCAGGGTGAATGCGGGTAGTGGATGTAGCT 159951
Query: 390 TTTCTTCTGAAGCGTCTTAGTTCGTAGCTGCCGAAGTGTAGCATTGAGGTGAGGAGCGCG 331
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159952 TTTCTTCTGAAGCGTCTTAGTTCGTAGCTGCCGAAGTGTAGCATTGAGGTGAGGAGCGCA 160011
Query: 330 CTAGCTAGGTGGAGTCTCCTTTCGGAACTACTTCTTTTCCTTTCTCTCTCTGCTATCCC- 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160012 CTAGCTAGGTGGAGTCTCCTTTCGGAACTACTTCTTTTCCTTTCTCTCTCTGCTATCCCA 160071
Query: 271 ----CTGAACTGTCAGTATCGAGACAAGTTCGGAATGTTGGCTGAGCGTAGACTAGTCTG 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160072 TCCACTGAACTGTCAGTATCGAGACAAGTTCGGAATGTTGGCTGAGCGTAGACTAGTCTG 160131
Query: 215 TTCAGGCAGTCACAGGCTTGCTAAAGCTAAAAACGGAACTTAGCTTCTCACTGACTACAT 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160132 TTCAGGCAGTCACAGGCTTGCTAAAGCTAAAAACGGAACTTAGCTTCTCACTGACTACAT 160191
Query: 155 CAGAAGCGAAATCCTCAACTTCAAATACAATGCGAGCTGGAACGGGGTTGCCTTAGCTAC 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160192 CAGAAGCGAAATCCTCAACTTCAAATACAATGCGAGCTGGAACGGGGTTGCCTTAGCTAC 160251
Query: 95 TGTGGTGTACATATGCCAGGAATCGCACCATAGCCGGAGTCGATCGAG 48
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 160252 TGTGGTGTACATATGCCAGGAATCACACCATAGCCGGAGTCGATCGAG 160313
Score = 167.011 bits (84.0), Expect = 3.72651e-42
Identities = 90/92 (98%)
Strand = Plus/Plus
Query: 1387 TTCGAATTCTGCTATGCCGGTGCACAAAGCAAGCACACAAGGACTGCGTAAATCTTTGGT 1446
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111914 TTCGAATTCTGCTGTGCCGGTGCACAAAGCAAGCACACAACGACTGCGTAAATCTTTGGT 111973
Query: 1447 CTGTCTATCATTGCCCATGTTGGGCTGACTCC 1478
||||||||||||||||||||||||||||||||
Sbjct: 111974 CTGTCTATCATTGCCCATGTTGGGCTGACTCC 112005
Score = 97.6282 bits (49.0), Expect = 2.86737e-21
Identities = 49/49 (100%)
Strand = Plus/Minus
Query: 49 AGGGCCAGATCTTGATGTAGAAAGGAGCTCTCAAGCTGAGGCGGAGAAG 1
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160327 AGGGCCAGATCTTGATGTAGAAAGGAGCTCTCAAGCTGAGGCGGAGAAG 160375
Score = 57.9812 bits (29.0), Expect = 2.46856e-09
Identities = 29/29 (100%)
Strand = Plus/Plus
Query: 1500 CTACTGATATTGACTGACCTGTTGATAGG 1528
|||||||||||||||||||||||||||||
Sbjct: 112088 CTACTGATATTGACTGACCTGTTGATAGG 112116
Score = 44.1047 bits (22.0), Expect = 3.71262e-05
Identities = 22/22 (100%)
Strand = Plus/Plus
Query: 1577 CGGCTTGGCTTCGCTATCGCTC 1598
||||||||||||||||||||||
Sbjct: 361586 CGGCTTGGCTTCGCTATCGCTC 361607
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597