BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig238
(938 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1632.0 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1631.97 bits (823.0), Expect = 0.0
Identities = 876/895 (98%)
Strand = Plus/Plus
Query: 1 TCGACCGCGACTGCTCGTCGCTTCTGGCCGCCTTATTCCGTCACCCGAGATCCAAGTCAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130722 TCGACCGCGACTGCTCGTCGCTTCTGGCCGCCTTATTCCGTCACCCGAGATCCAAGTCAG 130781
Query: 61 CACCGGCAAAGATCTCTTGATTCCTCGCGGCCGGGCCGGCTTGGAAGCAAGCTACCTCTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130782 CACCGGCAAAGATCTCTTGATTCCTCGCGGCCGGGCCGGCTTGGAAGCAAGCTACCTCTT 130841
Query: 121 GCCTATCTCACCCCCTTCCTTCAGCTGGGTGAGCCTTCGCTTTTTGGATCGTCTTCTGCC 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130842 GCCTATCTCACCTCCTTCCTTCAGCTGGGTGAGCCTTCGCTTTTTGGATCGTCTTCTGCC 130901
Query: 181 CAATGCGGTACCCCCCGTTTTTTGGTTCCCATTGGGTTTACCTTGTTCACAGGTCGACCC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130902 CAATGCGGTACCCCCCGTTTTTTGGTTCCCATTGGGTTTACCTTGTTCACAGGTCGACCC 130961
Query: 241 CATGGCAGCAAGAAAAGGCGATCTTGTGCTATACTCCGGTGATATCTTTCCTACCGAGAC 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 130962 CATGGCAGCAAGAAAAGGCGATCTTGTGCTATACTCCGGTGATCTCTTTCCTACCGAGAC 131021
Query: 301 ACGCAAACTCCCATCGTGTCCCAGATCACATTCCGTGAATCGAAAGGGGAAGCCTACTCA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131022 ACGCAAACTCCCATCGTGTCCCAGATCACATTCCGTGAATCGAAAGGGGAAGCCTACTCA 131081
Query: 361 TCTATCAGCTCCTCTCGTAGATCGGTGCGGTTTTACGAAGCGTCTAAGCACAGTTCACTC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131082 TCTATCAGCTCCTCTCGTAGATCGGTGCGGTTTTACGAAGCGTCTAAGCACAGTTCACTC 131141
Query: 421 GCGTTGATCAATCAAGAGGGTTGCCGCCACTCCT---TAAGGTTATCCGTTGTATCATAC 477
|||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
Sbjct: 131142 GCGTTGATCAATCAAGAGGGTTGCCGCCACTCCTTAATAAGGTTATCTGTTGTAT----C 131197
Query: 478 ACTTCTTGCATTCTGTCCCACGCTTCATACCTCCTCTTTCTTCTTAAGGTAAGATAAAGG 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131198 ACTTCTTGCATTCTGTCCCACGCTTCATACCTCCTCTTTCTTCTTAAGGTAAGATAAAGG 131257
Query: 538 GCCAGGCATGGTGGGGTAGGAGCATCCAGTCGGCAATCTTTTTGGCTTGACCAAGAAGTC 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131258 GCCAGGCATGGTGGGGTAGGAGCATCCAGTCGGCAATCTTTTTGGCTTGACCAAGAAGTC 131317
Query: 598 TTATGTCCTCCGAGTCGCACGGCGTTTTAACCGAAAGAACTTCTTGCGCAATTCATGCCT 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131318 TTATGTCCTCCGAGTCGCACGGCGTTTTAACCGAAAGAACTTCTTGCGCAATTCATGCCT 131377
Query: 658 TTCTGTTTTTATGACCAGAAATTCTTTCTTGATTTTCATAAAAAATTGTTCTCTGGACTT 717
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 131378 TTCTGTTTTTATGACCAGAAATTCTTTCTTTATTTTCATATAAAATTGTTCTCTGGACTT 131437
Query: 718 TTTATCAATATGAGGTGATCGTAACACAGTATATAAGACTCGTGATTCAGGCAATCCNAT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 131438 TTTATCAATATGAGGTGATCGTAACACAGTATATAAGACTCGTGATTCAGGCAATCCAAT 131497
Query: 778 CTTNCGTGTGTAANGNGGAAGCCCCCAAAAATGGTTTTCNAAAAATGNGTGATCAAAAGA 837
||| ||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 131498 CTTCCGTGTGTAAGGCGGAAGCCCCCAAAAATGGTTTTCAAAAAATGGGTGATCAAAAGA 131557
Query: 838 TCGAATTACTATGCCTATCTTGGTGGNCGTTACTTTTGGTGGTCTTTCTTTTTGG 892
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 131558 TCGAATTACTATGCCTATCTTGGTGGTCGTTACTTTTGGTGGTCTTTCTTTTTGG 131616
Score = 48.0694 bits (24.0), Expect = 1.34711e-06
Identities = 32/36 (89%)
Strand = Plus/Plus
Query: 900 GTCTAANTGCTCTCCTTTGTCTCANTGNTTNTCTCG 935
|||||| ||||||||||||||||| || || |||||
Sbjct: 132652 GTCTAAGTGCTCTCCTTTGTCTCATTGTTTATCTCG 132687
Score = 48.0694 bits (24.0), Expect = 1.34711e-06
Identities = 32/36 (89%)
Strand = Plus/Plus
Query: 900 GTCTAANTGCTCTCCTTTGTCTCANTGNTTNTCTCG 935
|||||| ||||||||||||||||| || || |||||
Sbjct: 363924 GTCTAAGTGCTCTCCTTTGTCTCATTGTTTATCTCG 363959
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597