BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig229
(2597 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 3140.5 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 3140.54 bits (1584.0), Expect = 0.0
Identities = 1728/1777 (97%)
Strand = Plus/Minus
Query: 1773 GCCCCTTTCTTCTTATTAGTCAGATAGGTTTGGAACCCTTTCCCCTTTTAATATAATAAT 1714
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 315293 GCCCCTTTCTTCTTATTAGTCAGATAGGTTTTCCACCCTTTCCCCTTTTAATATAATAAT 315352
Query: 1713 AAGGTAAGCTTCCAAAGCTCCTTTCTTCAGCTGGTGCGCAGGAGCGCACTTTCGTTTTCC 1654
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 315353 AAGGTAAGCTTCCAAAGCTCCTTTCTTCAGCTGGTGCGCAGGAGCACACTTTCGTTTTCC 315412
Query: 1653 CCCTAACCTTAACAAGGGGCTTTCATGAATAGGGATTTCCCGCCAGCAGTCTTCTCTTCC 1594
|| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315413 CC------TTTACAAGGGGCTTTCATGAATAGGGATTTCCCGCCAGCAGTCTTCTCTTCC 315466
Query: 1593 TATCACTTCACTTCGTTCTAGAAATCTGATCTCACCGGGCCGGGCGAAGGGGAAGGAAGG 1534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315467 TATCACTTCACTTCGTTCTAGAAATCTGATCTCACCGGGCCGGGCGAAGGGGAAGGAAGA 315526
Query: 1533 GATGGGTGGTCCGGGAACAACAACGAGAGAGGGCTCGTAGNNNNNNNNTCTCACTCTTCC 1474
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 315527 GATGGGTGGTCCGGGAACAACAACGAGAGAGGGCTCGTAGCCCCCCC-TCTCACTCTTCC 315585
Query: 1473 CCACGCCTATTTGTTCACCCGAGATGCAGAACTCNNNNNNNNNNNNNN--AATGAATAGA 1416
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 315586 CCACGCCTATTTGTTCACCCGAGATGCAGAACTCTTTTTTTTTTTTTTTTAATGAATAGA 315645
Query: 1415 TAGAGCCATGATACATTCCGAAATATTGTAAAGGTAAATAGACTCTTTTCGCCCCCTTTT 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315646 TAGAGCCATGATACATTCCGAAATATTGTAAAGGTAAATAGACTCTTTTCGCCCCCTTTT 315705
Query: 1355 CGATGTCTGCCTGAGGACCTATGTTAATGTTTTGGAAAGGGGATGTTCGCCTTTTGTAAC 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315706 CGATGTCTGCCTGAGGACCTATGTTAATGTTTTGGAAAGGGGATGTTCGCCTTTTGTAAC 315765
Query: 1295 AAATAGACCCACGATACGGACTAATATATGTTCTTACCCGCAAGCATAAGTAAGATCTAT 1236
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 315766 AAATAGACCCACGATACGGACTAATATATGTTCTTACCCGTAAGCATAAGTAAGATCTAT 315825
Query: 1235 TCATAGTTGGTCAGTCCCCCACGGCAGGGCTTCTCGCTTTTCATGAATGTGTCTCCCCCT 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315826 TCATAGTTGGTCAGTCCCCCACGGCAGGGCTTCTCGCTTTTCATGAATGTGTCTCCCCCT 315885
Query: 1175 CTGCTTATGTGAGTTTTACCCGCCTTTTACTCTGCTTGCTTCTGACTCCCTATGAGCCCT 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315886 CTGCTTATGTGAGTTTTACCCGCCTTTTACTCTGCTTGCTTCTGACTCCCTATGAGCCCT 315945
Query: 1115 TACTTTTTCGGAGGGTCGGCGGGGCATGGGAGCCTCAGCTCATGCATCGGTTTACCGAAA 1056
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 315946 TACTTTTTCGGAGGGTCGGCGGGACATGGGAGCCTCAGCTCATGCATCGGTTTACCGAAA 316005
Query: 1055 TAACCTCTGCTCTCCCACTTCCTTCTATTCAAAAGGCGAGCAGCCCTTAAACAAAAAGGC 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316006 TAACCTCTGCTCTCCCACTTCCTTCTATTCAAAAGGCGAGCAGCCCTTAAACAAAAAGGC 316065
Query: 995 CCTAAAAGGGTTCTTCTTTATATATTACATAAGCCCT-AAAGTAGGTAGCCCCGAAAGCC 937
| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 316066 C-TAAGAGGGTTCTTCTTTATATATTACATAAGCCCTTAAAGTAGGTAGCCCCGAAAGCC 316124
Query: 936 GAACTCAGCAGAGTGGGTTTTGGCTTGCCCCTTTCTATCTTATTAGTCAAACCTAAACGT 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316125 GAACTCAGCAGAGTGGGTTTTGGCTTGCCCCTTTCTATCTTATTAGTCAAACCTAAACGT 316184
Query: 876 CCTTATTTCAAAAAACAGCGCTAACACCCTATCTATAGTAAGGGGCCTTTTCAATTGAAT 817
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 316185 CCTTATTTCAAAAAACAGCGCTAACACCCTATCTATAGTAAGGGGCCTTTTCAATTCAAT 316244
Query: 816 CTCCCACTTGATTTCGGACAGTCAAATAGAAAGACTCTTTGTTAGCTCTTCGTGCCTCCT 757
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 316245 CTCCCACTTGATTTCGGACAGTCAAATATAAAGACTCTTTGTTAGCTCTTCGTGCCTCCT 316304
Query: 756 TGACTTCTCAAACTGAACTAAGACTGTCCAACTAGAG-TATAGCCGGAAGGAGCTCTTTT 698
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 316305 TGACTTCTCAAACTGAACTAAGACTGTCCAACTAGAGGTATAGCCGGAAGGAGCTCTTTT 316364
Query: 697 TGTATTGAAAGTGTTTTCAAATAGCAATCCATCGCGTCGGTAATAAGACTTAGAGTAAAC 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316365 TGTATTGAAAGTGTTTTCAAATAGCAATCCATCGCGTCGGTAATAAGACTTAGAGTAAAC 316424
Query: 637 GAACGATTCAAGCTCCTTACAGAAGGCAGTTCAGCTTGATAACTCGATAAGCTGTATTGA 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316425 GAACGATTCAAGCTCCTTACAGAAGGCAGTTCAGCTTGATAACTCGATAAGCTGTATTGA 316484
Query: 577 CAGAGCAAAACCACTCTTTCAAAGGTGGGATCAATCCCAACCTATTCTTCTTAGCCTAAC 518
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316485 CAGAACAAAACCACTCTTTCAAAGGTGGGATCAATCCCAACCTATTCTTCTTAGCCTAAC 316544
Query: 517 AGTCTATTCGTGGAAGTAAATTATCCAAAAAGTCTCCTTACTAGACCTAACATCCTGTCA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316545 AGTCTATTCGTGGAAGTAAATTATCCAAAAAGTCTCCTTACTAGACCTAACATCCTGTCA 316604
Query: 457 TCGCTTTCAGATACAAGGAAGTTGGACTAGTTATTAGACCAACTATCTCACGCTCTCTCT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316605 TCGCTTTCAGATACAAGGAAGTTGGACTAGTTATTAGACCAACTATCTCACGCTCTCTCT 316664
Query: 397 CTCAAACCCAGCCAAAGGAGCACATCTAGTTGAAAGACTCTCATTCTTATTTAGAATGGG 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316665 CTCAAACCCAGCCAAAGGAGCACATCTAGTTGAAAGACTCTCATTCTTATTTAGAATGGG 316724
Query: 337 AAGATCTTTCAGTTCGTAAAAGCTTAAGCTTAAGAGCTTTATCCATAAGTAATGAGAGGA 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316725 AAGATCTTTCAGTTCGTAAAAGCTTAAGCTTAAGAGCTTTATCCATAAGTAATGAGAGGA 316784
Query: 277 GACTTTTAGAAAACCCTCATGCCTTCTCTGGAGACAGAGATCTTACTGCTACCTCCGAGT 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316785 GACTTTTAGAAAACCCTCATGCCTTCTCTGGAGACAGAGATCTTACTGCTACCTCCGAGT 316844
Query: 217 CTGACAATCTAGTTTTCTAGGCTTTTAGCTTTTAGAATCCCCTTTCTCTCTGATCCTTCG 158
||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 316845 CTGACAATCTAGTCTTCTAGGCTTTTCGCTTTTAGAATCCTCTTTCTCTCTGATCCTTCG 316904
Query: 157 TGCGTTCTTTATCCTATTCCGATTCGATTTAGCTTTCTTTTAGTTGCTATATCTTTATTT 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316905 TGCGTTCTTTATCCTATTCCGATTCGATTTAGCTTTCTTTTAGTTGCTATATCTTTATTT 316964
Query: 97 TGAAGAAAGGTGGATCTATAGGGGAAAGGATAAATATATAGTATCAATAATAAGATAGTT 38
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316965 TGAAGAAAGGTGGATCTATAGGGGAAAGGATAAATATATAGTATCAATAAGAAGATAGTT 317024
Query: 37 TGATTTTCTTGTTTGCACATGTGTATTGTCTAATCTA 1
|||||||||||||||||||||||||||||||||||||
Sbjct: 317025 TGATTTTCTTGTTTGCACATGTGTATTGTCTAATCTA 317069
Score = 1392.11 bits (702.0), Expect = 0.0
Identities = 751/767 (98%)
Strand = Plus/Minus
Query: 2565 TTCTTGCATAGAAGAACGCAACTGTTGCAAAAACCGGGATTTTAGTAGTAGGCGGCATCC 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314535 TTCTTGCATAGAAGAACGCAACTGTTGCAAAAACCGGGATTTTAGTAGTAGGCGGCATCC 314594
Query: 2505 CCTCTTAGTTTTGAGTAGGCGGAACCATTCTGTTTTGGTTCTTCTCCACGGGTGATCCAG 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314595 CCTCTTAGTTTTGAGTAGGCGGAACCATTCTGTTTTGGTTCTTCTCCACGGGTGATCCAG 314654
Query: 2445 GAATTTTCCTATTATTTTCTCAACTGAGATTTCGATATAGAAGGATCTCTTTATTTCTTC 2386
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 314655 GAATTTTCCTATTATTTTTTCAACTGAGATTTCGATATAGAAGGATCTCTTTATTTCTTC 314714
Query: 2385 ACCGCGGGTTCTCGCATCATTTTCTTGAAAAGATATTATATCACCGTGGGAGAGTTTAAA 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314715 ACCGCGGGTTCTCGCATCATTTTCTTGAAAAGATATTATATCACCGTGGGAGAGTTTAAA 314774
Query: 2325 ATGAGTAATGTTAACCATTCCATTATTCACACAAACCCTTCGATGACTTATCGGCTGCCT 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314775 ATGAGTAATGTTAACCATTCCATTATTCACACAAACCCTTCGATGACTTATCGGCTGCCT 314834
Query: 2265 TGCTTGAGGAATAGTTTCACAAAAATGGAGACGAACCGGGATAACGTCCGATCTTGTTTC 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314835 TGCTTGAGGAATAGTTTCACAAAAATGGAGACGAACCGGGATAACGTCCGATCTTGTTTC 314894
Query: 2205 TGGATTGAGTAGAAAGGGGATATATGAAGTTCGTTCTCTTCCTCTGTGCATCTCTGTGAT 2146
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314895 TGGATTGAGTAGAAAAGGGATATATGAAGTTCGTTCTCTTCCTCTGTGCATCTCTGTGAT 314954
Query: 2145 GGGTAAATCTCCATAAAAAAGGGACAACTTTCGTGTAGTTTGTGATTGGATGTAACTGTT 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314955 GGGTAAATCTCCATAAAAAAGGGACAACTTTCGTGTAGTTTGTGATTGGATGTAACTGTT 315014
Query: 2085 AAGATTTTCTCTAGAATAAATCTTTCTCTTAATAGATCTCTTCTTGTTCCTCAATCTTCC 2026
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315015 AAGATTTTCTCTAGAATAAATCTTTCTCTTAATAGATCTCTTCTTGTTCCTCAATCTTCG 315074
Query: 2025 GAGAATACGGCGTTGTATTATTGTAAGTTCTCTGTTCCAAACATTTCCTGAAAGTAGACG 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315075 GAGAATACGGCGTTGTATTATTGTAAGTTCTCTGTTCCAAACATTTCCTGAAAGTAGACG 315134
Query: 1965 ACAAGTTTTAAATCTTAATGCAGGCAAGGCATATCTCGTTGAATCAGTCTTTTTCGCCAC 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315135 ACAAGTTTTAAATCTTAATGCAGGCAAGGCATATCTCGTTGAATCAGTCTTTTTCGCCAC 315194
Query: 1905 ATCGCGTATAAGGGGCAACTCTGTCTCCGCCTCTGCTGCTGGCGGGCAGATGTATAATGT 1846
||||||||||| ||| | | || |||| ||||||||||||||||||||||||||
Sbjct: 315195 ATCGCGTATAACGGGAA----TCGAACCCCCTCCGCTGCTGGCGGGCAGATGTATAATGT 315250
Query: 1845 ACTACTTCGATCCAGCAACTTCTTAGGAGTAGGTTTTGGCTTGCCCC 1799
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 315251 ACTACTTCGATCCAGCAACTTGTTAGGAGTAGGTTTTGGCTTGCCCC 315301
Score = 159.081 bits (80.0), Expect = 1.43812e-39
Identities = 123/137 (90%)
Strand = Plus/Minus
Query: 1939 AGGCATATCTCGTTGAATCAGTCTTTTTCGCCACATCGCGTATAAGGGGCAACTCTGTCT 1880
|||||||||| |||||||||||||||||||||||||||||||||| ||| | |
Sbjct: 58055 AGGCATATCTTGTTGAATCAGTCTTTTTCGCCACATCGCGTATAACGGGAATCGAA---- 58110
Query: 1879 CCGCCTCTGCTGCTGGCGGGCAGATGTATAATGTACTACTTCGATCCAGCAACTTCTTAG 1820
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 58111 CCCCCTCCGCTGCTGGCGGGCAGATGTATAATGTACTACTTCGATCCAGCAACTTGTTAG 58170
Query: 1819 GAGTAGGTTTTGGCTTG 1803
|||||||||||||||||
Sbjct: 58171 GAGTAGGTTTTGGCTTG 58191
Score = 159.081 bits (80.0), Expect = 1.43812e-39
Identities = 123/137 (90%)
Strand = Plus/Minus
Query: 1939 AGGCATATCTCGTTGAATCAGTCTTTTTCGCCACATCGCGTATAAGGGGCAACTCTGTCT 1880
|||||||||| |||||||||||||||||||||||||||||||||| ||| | |
Sbjct: 408805 AGGCATATCTTGTTGAATCAGTCTTTTTCGCCACATCGCGTATAACGGGAATCGAA---- 408860
Query: 1879 CCGCCTCTGCTGCTGGCGGGCAGATGTATAATGTACTACTTCGATCCAGCAACTTCTTAG 1820
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 408861 CCCCCTCCGCTGCTGGCGGGCAGATGTATAATGTACTACTTCGATCCAGCAACTTGTTAG 408920
Query: 1819 GAGTAGGTTTTGGCTTG 1803
|||||||||||||||||
Sbjct: 408921 GAGTAGGTTTTGGCTTG 408941
Score = 69.8753 bits (35.0), Expect = 1.02673e-12
Identities = 35/35 (100%)
Strand = Plus/Minus
Query: 2177 GTTCGTTCTCTTCCTCTGTGCATCTCTGTGATGGG 2143
|||||||||||||||||||||||||||||||||||
Sbjct: 115621 GTTCGTTCTCTTCCTCTGTGCATCTCTGTGATGGG 115655
Score = 65.9106 bits (33.0), Expect = 1.60308e-11
Identities = 33/33 (100%)
Strand = Plus/Plus
Query: 1937 CCTTGCCTGCATTAAGATTTAAAACTTGTCGTC 1969
|||||||||||||||||||||||||||||||||
Sbjct: 313905 CCTTGCCTGCATTAAGATTTAAAACTTGTCGTC 313937
Score = 55.9988 bits (28.0), Expect = 1.54417e-08
Identities = 34/36 (94%)
Strand = Plus/Minus
Query: 1803 GCCCCCCTCCTTACAGTCAAGTGGCTGAACGCCCCT 1768
||||| ||||||| ||||||||||||||||||||||
Sbjct: 213050 GCCCCTCTCCTTAGAGTCAAGTGGCTGAACGCCCCT 213085
Score = 55.9988 bits (28.0), Expect = 1.54417e-08
Identities = 34/36 (94%)
Strand = Plus/Minus
Query: 1688 TTCAGCTGGTGCGCAGGAGCGCACTTTCGTTTTCCC 1653
|||||||||||||||||||||||||| | |||||||
Sbjct: 376685 TTCAGCTGGTGCGCAGGAGCGCACTTCCATTTTCCC 376720
Score = 54.0164 bits (27.0), Expect = 6.10158e-08
Identities = 30/31 (97%)
Strand = Plus/Minus
Query: 1773 GCCCCTTTCTTCTTATTAGTCAGATAGGTTT 1743
||||||||| |||||||||||||||||||||
Sbjct: 231683 GCCCCTTTCCTCTTATTAGTCAGATAGGTTT 231713
Score = 54.0164 bits (27.0), Expect = 6.10158e-08
Identities = 37/39 (95%)
Strand = Plus/Minus
Query: 926 GAGTGGGTTTTGGCTTGCCCCTTTCTATCTTATTAGTCA 888
|||| ||||||||||||||||||||| ||||||||||||
Sbjct: 315277 GAGTAGGTTTTGGCTTGCCCCTTTCT-TCTTATTAGTCA 315315
Score = 50.0517 bits (25.0), Expect = 9.52661e-07
Identities = 28/29 (97%)
Strand = Plus/Plus
Query: 1453 CGGGTGAACAAATAGGCGTGGGGAAGAGT 1481
|||| ||||||||||||||||||||||||
Sbjct: 48105 CGGGGGAACAAATAGGCGTGGGGAAGAGT 48133
Score = 50.0517 bits (25.0), Expect = 9.52661e-07
Identities = 28/29 (97%)
Strand = Plus/Plus
Query: 832 CCCCTTACTATAGATAGGGTGTTAGCGCT 860
||||||||||||||||||| |||||||||
Sbjct: 198977 CCCCTTACTATAGATAGGGCGTTAGCGCT 199005
Score = 48.0694 bits (24.0), Expect = 3.76432e-06
Identities = 33/36 (92%)
Strand = Plus/Minus
Query: 1834 CCAGCAACTTCTTAGGAGTAGGTTTTGGCTTGCCCC 1799
|||||||||| |||||||| |||||||||||||||
Sbjct: 231652 CCAGCAACTTGTTAGGAGTCAGTTTTGGCTTGCCCC 231687
Score = 44.1047 bits (22.0), Expect = 5.87736e-05
Identities = 22/22 (100%)
Strand = Plus/Plus
Query: 887 TTGACTAATAAGATAGAAAGGG 908
||||||||||||||||||||||
Sbjct: 97115 TTGACTAATAAGATAGAAAGGG 97136
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597