BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig227
(877 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1291.0 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1291.01 bits (651.0), Expect = 0.0
Identities = 697/712 (98%)
Strand = Plus/Plus
Query: 160 TCCCATGCTTTCCGTCGGTCAACAACCAACTAAA----TCTATACCTCTTCACTACTCGT 215
||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 257619 TCCCATGCTTTCCGTTGGTCAACAACCAACCAAAGTGCTCTATACTTCTTCACTACTCGT 257678
Query: 216 ACAGGCTTGACGGAGTGAAGCTGTATTGAGGGAATCTTTTTGTCTCAATCAATCAAGAAT 275
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 257679 ACAGGCTTGACGGAGTTAAGCTGTATTGAGGGAATCGTTTTGTCTCAATCAATCAAGAAT 257738
Query: 276 GCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCTTTTCCTCTT 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257739 GCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCTTTTCCTCTT 257798
Query: 336 TACTTTCTATATTCCTATATGCAATGATGGAGATGGAGTACTTGGGATCAGCAGAATTCT 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257799 TACTTTCTATATTCCTATATGCAATGATGGAGATGGAGTACTTGGGATCAGCAGAATTCT 257858
Query: 396 AAAACTACGGAACCAACTGGTTTCACACCGGGAGAACAAGATCCGGAGCAACGACCCCAA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257859 AAAACTACGGAACCAACTGGTTTCACACCGGGAGAACAAGATCCGGAGCAACGACCCCAA 257918
Query: 456 CAGTTTGGAAGATATCTTGAGAAAAGGTTTTAGCACCGGTGTATCCTATATGTACTCAAG 515
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257919 CTGTTTGGAAGATATCTTGAGAAAAGGTTTTAGCACCGGTGTATCCTATATGTACTCAAG 257978
Query: 516 TTTATTCGAAGTATCCCAATGGTGTAACGCCGTCGACTTCTTGGGAAAAAGGAGGAAGAT 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257979 TTTATTCGAAGTATCCCAATGGTGTAACGCCGTCGACTTCTTGGGAAAAAGGAGGAAGAT 258038
Query: 576 GACTTTAATCTCTTGTTTCGGAGAAATAAGTGGCTCACGAGGAATGGAAAGAAACATATT 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258039 GACTTTAATCTCTTGTTTCGGAGAAATAAGTGGCTCACGAGGAATGGAAAGAAACATATT 258098
Query: 636 CTATTTGATCTCTAAGTCTGTACATAGCAATCCTGGGTGGGTCATCACTTGTAGGAATGA 695
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 258099 ATATTTGATCTCTAAGTCCGTACATAGCAATCCTGGGTGGGTCATCACTTGTAGGAATGA 258158
Query: 696 CATAATGCTAATCCATGTTCCACACGGCCAAGGAAGCATCGGTTTTTAATCTCATTATGA 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258159 CATAATGCTAATCCATGTTCCACACGGCCAAGGAAGCATCGGTTTTTAATCTCATTATGA 258218
Query: 756 CTTGGTTGTTCGGAAGAGCAATTAATTCGATCAGAATAGTGGAATGGAAGGCAGTAAAAG 815
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258219 CTTGGTCGTTCGGAAGAGCAATTAATTCGATCAGAATAGTGGAATGGAAGGCAGTAAAAG 258278
Query: 816 AATGAAATACTCCTTTCTTTTCCAATCGCCCCGCGAAGACAGACGCTCGGAA 867
||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 258279 AATTAAATACTCCTTTCTTTTCCAATCGCCCCGCGAAGACAGACGTTCGGAA 258330
Score = 281.987 bits (142.0), Expect = 4.82474e-77
Identities = 176/187 (94%)
Strand = Plus/Plus
Query: 151 CTTTTTTGATCCCATGCTTTCCGTCGGTCAACAACCAACTAAA----TCTATACCTCTTC 206
||||||| ||||||||||||||| |||||||||||||| ||| ||||||| |||||
Sbjct: 85348 CTTTTTTTCTCCCATGCTTTCCGTTGGTCAACAACCAACCAAAGTGCTCTATACTTCTTC 85407
Query: 207 ACTACTCGTACAGGCTTGACGGAGTGAAGCTGTATTGAGGGAATCTTTTTGTCTCAATCA 266
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 85408 ACTACTCGTACAGGCTTGACGGAGTTAAGCTGTATTGAGGGAATCGTTTTGTCTCAATCA 85467
Query: 267 ATCAAGAATGCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCT 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85468 ATCAAGAATGCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCT 85527
Query: 327 TTTCCTC 333
|||||||
Sbjct: 85528 TTTCCTC 85534
Score = 281.987 bits (142.0), Expect = 4.82474e-77
Identities = 176/187 (94%)
Strand = Plus/Plus
Query: 151 CTTTTTTGATCCCATGCTTTCCGTCGGTCAACAACCAACTAAA----TCTATACCTCTTC 206
||||||| ||||||||||||||| |||||||||||||| ||| ||||||| |||||
Sbjct: 286848 CTTTTTTTCTCCCATGCTTTCCGTTGGTCAACAACCAACCAAAGTGCTCTATACTTCTTC 286907
Query: 207 ACTACTCGTACAGGCTTGACGGAGTGAAGCTGTATTGAGGGAATCTTTTTGTCTCAATCA 266
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 286908 ACTACTCGTACAGGCTTGACGGAGTTAAGCTGTATTGAGGGAATCGTTTTGTCTCAATCA 286967
Query: 267 ATCAAGAATGCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCT 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286968 ATCAAGAATGCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATGCCT 287027
Query: 327 TTTCCTC 333
|||||||
Sbjct: 287028 TTTCCTC 287034
Score = 168.993 bits (85.0), Expect = 4.99013e-43
Identities = 119/130 (92%)
Strand = Plus/Minus
Query: 276 CATTCTTGATTGATTGAGACAAAAAGATTCCCTCAATACAGCTTCACTCCGTCAAGCCTG 217
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 145277 CATTCTTGATTGATTGAGACAAAACGATTCCCTCAATACAGCTTAACTCCGTCAAGCCTG 145336
Query: 216 TACGAGTAGTGAAGAGGTATAGA----TTTAGTTGGTTGTTGACCGACGGAAAGCATGGG 161
||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 145337 TACGAGTAGTGAAGAAGTATAGAGCACTTTGGTTGGTTGTTGACCAACGGAAAGCATGGG 145396
Query: 160 ATCAAAAAAG 151
| |||||||
Sbjct: 145397 AGAAAAAAAG 145406
Score = 149.169 bits (75.0), Expect = 4.63012e-37
Identities = 109/120 (91%)
Strand = Plus/Minus
Query: 266 TGATTGAGACAAAAAGATTCCCTCAATACAGCTTCACTCCGTCAAGCCTGTACGAGTAGT 207
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 25769 TGATTGAGATAAAAAGATTCCCTCAATACAGCTTAACTCCGTCAAGCCTGTACGAGTAGT 25828
Query: 206 GAAGAGGTATAGA----TTTAGTTGGTTGTTGACCGACGGAAAGCATGGGATCAAAAAAG 151
||||| ||||||| ||| |||||||||||||| ||||||||||||||| |||||||
Sbjct: 25829 GAAGAAGTATAGAGCACTTTGGTTGGTTGTTGACCAACGGAAAGCATGGGAGAAAAAAAG 25888
Score = 83.7518 bits (42.0), Expect = 2.2818e-17
Identities = 67/75 (89%)
Strand = Plus/Plus
Query: 150 CCTTTTTTGATCCCATGCTTTCCGTCGGTCAACAACCAACTAAA----TCTATACCTCTT 205
|||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 156207 CCTTTTTTTCTCCCATGCTTTCCGTTGGTCAACAACCAACTAAAGTGCTCTATACTTCTT 156266
Query: 206 CACTACTCGTACAGG 220
|||||||||||||||
Sbjct: 156267 CACTACTCGTACAGG 156281
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597