BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig221
(981 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1560.6 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1560.61 bits (787.0), Expect = 0.0
Identities = 919/964 (95%)
Strand = Plus/Minus
Query: 958 AAGTGACTAGCTNGGCTGGTGATGCGTNCNCCCACTTNCNCGCTTCCNTGCAANCNCGAA 899
|||||||||||| |||||||||||||| | ||||||| | ||||||| ||||| | ||||
Sbjct: 45507 AAGTGACTAGCTTGGCTGGTGATGCGTTCACCCACTTGCACGCTTCCTTGCAAGCACGAA 45566
Query: 898 ANNNTTAGTTCGCCCGCTNCCACACGGGCCGGTGTACTCTTATCGCTAACCCCGAGAGAG 839
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 45567 ATCCTTAGTTCGCCCGCTACCACACGGGCCGGTGTACTCTTATCGCTAACCCCGAGAGAG 45626
Query: 838 GCTATACTCTAAGAGCCAACCGACTCATTATCCCTGGACGCAAGGATTAAGAAATAGCGA 779
|||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 45627 GCTATACTCTAACAGCCAACCGACTCATTATTCCTGGCCGCAAGGATTAAGAAATAGCAA 45686
Query: 778 TGTATCAGGGGCTGAGCGTACCTTCCGCTCAGGAACAAGAAATGGAGCTATTAAGTTAAG 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45687 TGTATCAGGGGCTGAGCGTACCTTCCGCTCAGGAACAAGAAATGGAGCTATTAAGTTAAG 45746
Query: 718 GTGCCGCTTTCCTTTTTCTAGCCCTTCTTTGGGTTCCCTATCGATGCGTGTATGCCTTCG 659
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 45747 GTGCCGCTTTCCTTTTTCTAGCTCTTCTTTGGGTTCCCTATCGATGCGTGTATGCCTTCG 45806
Query: 658 TCGAAGAAAG-AGGGGAATCACAAGAAATTTTCATACAACTAGGCCTAATTCCATCGATG 600
|||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 45807 TCGAAGAAAGAAGGGGAATCACAAGAAATTTTCATAGACCTAGGCCTAATTCCATCGATG 45866
Query: 599 AATCATTCGAGAACGAATTTTGCGAGACTAATCTAATCTTATTCAACCTTAGATGGGAAT 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 45867 AATCATTCGAGAACGAATTTAGCGAGACTAATCTAATCTTATTCAACCTTAGATGGGAAT 45926
Query: 539 TAGGGCGAAGCCTGGGGCGGTCTCTGCCTTCTTAACACGCGGCACACCAACTTGAAGTCT 480
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 45927 TAGGGCGAAGCCTGGGGCGGTCTCTGCCTTCTTAAGACGCGTTACACCAACTTGAAGTCT 45986
Query: 479 GATTTGAAAATCTCTCTCTACCTTCACAAAACTTCTCGCGCCCTTCTCGTAGTTTTGACT 420
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 45987 GATTTTAAAATCTCTCTCTACCTTCAGAAAACTTCTCGCGCCCTTCTCGTAGTTTTGACT 46046
Query: 419 TGCTCTTAGGTAGGCTACCGTTGACCGGCTTCGCGAGACCATTTCGGTCTACACACACAT 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46047 TGCTCT----TAGGCTACCGTTGACCGGCTTCGCGAGACCATTTCGGTCTACACACACA- 46101
Query: 359 GGGTGGCTAAGCGCTATTGGGCGGAGCTTTCTCTCAATCCAAGCTAACTAATAGAAGAAA 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 46102 ---TGGCTAAGCGCTATTGGGCGGAGCTT--TCTCAATCCAAGCTAACTAATAGAAGAAA 46156
Query: 299 AGAGAAGAAAGGAAGATCTTATAAGGGACTCACCCCATCTTTACATAAGCTATTTCTTGA 240
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 46157 AGAGAAGAAAGGAAGATCTTATAAGAGACTCACCCCATCTTTACATAAGCAATTTCTTGA 46216
Query: 239 ACGGAAAAAATAGATGCTTTCATGGACTACTTTGACTTTAGGGATTTGCTTCATCATTAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46217 ACGGAAAAAATAGATGCTTTCATGGACTACTTTGACTTTAGGGATTTGCTTCATCATTAG 46276
Query: 179 CTAAAGAAGAGAGACAAGGGGGAAGCTCAGTCTAATTGTCCGAAGTGATTCTTTCTTGAT 120
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 46277 CTAAAGAAGAGAGAGAAGGGGGAAGCTTAGTCTAATTGTCCGAAGTGATTCTTTCTTGAT 46336
Query: 119 TGGATGCCAGCTTTCTCTTAAT-----TCGTGCACTTACATACAAATCTATAGGTAGTTC 65
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 46337 TGGATGCCAGCTTTCTCTTAATTCCTATCGTGCACTTACATACAAATCTATAGGTAGTTC 46396
Query: 64 ATCTCCTTCTAAGAAAAATATCCAAAGTTTTCATTTTTGATCGAATTCCGTCTAGTAAGC 5
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46397 ATCTCCTTCTAAGAAAAATATCCAAAGTTTTCATTTTTGATCGAATTCCGTCTAGTAAGC 46456
Query: 4 CTCG 1
||||
Sbjct: 46457 CTCG 46470
Score = 50.0517 bits (25.0), Expect = 3.56787e-07
Identities = 25/25 (100%)
Strand = Plus/Minus
Query: 397 GACCGGCTTCGCGAGACCATTTCGG 373
|||||||||||||||||||||||||
Sbjct: 400402 GACCGGCTTCGCGAGACCATTTCGG 400426
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597