BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig217
(956 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1152.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1152.24 bits (581.0), Expect = 0.0
Identities = 714/760 (94%)
Strand = Plus/Plus
Query: 179 CTTAGCTGCTCTGGATTCTATTCTAGATGCTACTTACTTACATATTCCGTTTTATTTCAA 238
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 140390 CTTAGCTGCTCTGGATTCTATTCTAGATGCTACTTACTTACATATGATGTTTTATTTCAC 140449
Query: 239 AAGGTAGCCCATCTATATAGCATAGCTGAAAGCGGACAAAAAGGGCTGTTCCCATTTCGT 298
| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 140450 AGGGTAGCCCATCTATATAGCATAGCTGAAAGCGGACAAAAAAGGCTGTTCCCATAGCGT 140509
Query: 299 TACGTAGGCTTAGCTTAGCCCCTCTCTCTAACTAAGGATTCAATCCAGTCCCAAGCGTCC 358
|||||||||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140510 TACGTAGGCTTAGC-----CCCTCTCTCTAACTAAGGATTCAATCCAGGGACGCTTGGGA 140564
Query: 359 CTGGATTGAATCTTCCGGTTTTTTATATCAGCGAGCTAGACCCCTAAAATGCTCGGTACT 418
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140565 CTGGATTGAATCTTCCGCTTTTTTATATCAGCGAGCTAGACCCCTAAAATGCTCGGTACT 140624
Query: 419 TTAAGGTGGGGAAACCAATCCTCCCTGCTCGTTCCTAGGTCTTTTCNNNNNNNNNNNNN- 477
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 140625 TTAAGGTGGGGAAACCAATCCTCCTTGCTCGTTCCTAGGTCTTTTCTTTTTTTTTTTTAT 140684
Query: 478 CGCCTTATTTCATTCACTGATTTCTGTAATTCATTTCTCTTTTATGAATAGTTGGTTGTG 537
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 140685 CGCCTTATTTCATTCACTGATTTCTTTAATTCATTTCTCTTTTATGAATAGTTGGTTGTG 140744
Query: 538 TTGGATGATTGGTGGGTAGTTTGAAGGACGAATGCCGGAGGGCAGCTTTTTAGAGCGGGC 597
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 140745 TTGGATGATTGATGGGTAGTTTGAAGGACGAATGCTGGAGGGCAGCTTTTTAGAGCGGGC 140804
Query: 598 GCTCTGTGCGGTATTTTTTATGTTTATGTCTGTATTTGTTCTGTAGTTGGATCAGCCCTT 657
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 140805 GCTCTGTGCGGTATTTTTGATGTTTATGTCTGTATTTGTTCTGTAGTTGGATCAGCCGTT 140864
Query: 658 TTGCTTAGTATGTCGAGGGTGGATTAATGAATGACTGCTTTAGCTCTATCGACAGAGGCC 717
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140865 TTCCTTAGTATGTCGAGGGTGGATTAATGAATGACTGCTTTAGCTCTATCGACAGAGGCC 140924
Query: 718 CC-GCCTAAAGTTCTGACCCTTGCTTCAAGCTCTGCTCTGGGAGAATGGCCCCACCCGAT 776
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140925 CCCGCCTAAAGTTCTGACCCTTGCTTCAAGCTCTGCTCTGGGAGAATGGCCCCACCCGAT 140984
Query: 777 GTGATCGACGTCGCATCTCGACCTGTTCGTGCTGCGGAGCGAACACCTACTTTGAGGAGA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140985 GTGATCGACGTCGCATCTCGACCTGTTCGTGCTGCGGAGCGAACACCTACTTTGAGGAGA 141044
Query: 837 AAGAAATCCTTTCCTAAAGTGAAAGTGAATTCAAGCCGGTACATCATAAATAAAAAGAGA 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141045 AAGAAATCCTTTCCTAAAGTGAAAGTGAATTCAAGCCGGTACATCATAAATAAAAAGAGA 141104
Query: 897 GGCTTCAGTTTCTTGCTTATCTATGGAATATCGCATTGTT 936
||||||||||||||||||||||||||||||||||||||||
Sbjct: 141105 GGCTTCAGTTTCTTGCTTATCTATGGAATATCGCATTGTT 141149
Score = 71.8576 bits (36.0), Expect = 9.47994e-14
Identities = 36/36 (100%)
Strand = Plus/Minus
Query: 370 GATTCAATCCAGGGACGCTTGGGACTGGATTGAATC 335
||||||||||||||||||||||||||||||||||||
Sbjct: 140541 GATTCAATCCAGGGACGCTTGGGACTGGATTGAATC 140576
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597