BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig215
(1378 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 2510.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 2510.15 bits (1266.0), Expect = 0.0
Identities = 1345/1373 (98%)
Strand = Plus/Minus
Query: 1373 CAAGCTTACTTACTAATAAAGCGGCAAGAAGCACCTTCTTTTCTTTCTCATCTCAAAGTC 1314
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3988 CAAGCTTACTTACTAATAAAGCGGCAAGAAGCACCTTCTTT----------CTCAAAGTC 4037
Query: 1313 AACTTTCTCCCCTTTTACTAGTAGTTGAGTGCTCATTGTTGTTCGGATCTTGACCGGATC 1254
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4038 AACTTTCTCCCTTTTTACTAGTAGTTGAGTGCTCATTGTTGTTCGGATCTTGACCGGATC 4097
Query: 1253 CGAGCTTCCCAAGCTCTATGCTGTTGGGGAACTCTGCAAGGGTCTTACCACCTTCTTGAT 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4098 CGAGCTTCCCAAGCTCTATGCTGTTGGGGAACTCTGCAAGGGTCTTACCACCTTCTTGAT 4157
Query: 1193 TTACTATATTTGAGTCTTTGGAGTACTTTAGGATTATATTCCGCGCCGAGGATTTGTGCT 1134
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4158 TGACTATATTTGAGTCTTTGGAGTACTTTAGGATTATATTCCGCGCCGAGGATTTGTGCT 4217
Query: 1133 TGTGGGCCGGGGTGAATATTGCAGACCAGCGGATCTGGTGGTCGACAATCGTTCGGACTT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4218 TGTGGGCCGGGGTGAATATTGCAGACCAGCGGATCTGGTGGTCGACAATCGTTCGGACTT 4277
Query: 1073 GGTAAAGGTTGTCGCAGCACCTGTAGTAGGACAGAGGACTTATCGCGATGCCTGCGGACC 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4278 GGTAAAGGTTGTCGCAGCACCTGTAGTAGGACAGAGGACTTATCGCGATGCCCGCGGACC 4337
Query: 1013 AATTTACGATGTCTCCGTCGCTGACGTTTGTCAAGCAGGCCACGTGGATTGGCCAGGGTC 954
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4338 AATTTACGATGTCTCCGTCGCTGACGTTCGTCAAGCAGGCCACGTGGATTGGCCAGGGTC 4397
Query: 953 TTCTTCGGCTAATGAGACCTCGATCCCGAAGCCTTCGAAGTATCTTTTTGATAGGTGCCT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4398 TTCTTCGGCTAATGAGACCTCGATCCCGAAGCCTTCGAAGTATCTTTTTGATAGGTGCCT 4457
Query: 893 CTATTTGTATGGGGAATTCGCTGCTGATAGATCTCGCCCAGTGTCCCCCTCCTTCCCCCG 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4458 CTATTTGTATGGGGAATTCGCTGCTGATAGATCTCGCCCAGTGTCCCCCTCCTTCCCCCG 4517
Query: 833 CCGCCTTCCGACCCGCGGGAGTATACAATGACAATGTCGGGGCATGAGTGCCCGATCGTG 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4518 CCGCCTTCCGACCCGCGGGAGTATACAATGACAATGTCGGGGCATGAGTGCCCGATCGTG 4577
Query: 773 AGACTACCTGTTGAACGTCCGATGGCACCTTGCTCCGACCTGAGCTATGCAACAACGAGA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4578 AGACTACCTGTTGAACGTCCGATGGCACCTTGCTCCGACCTGAGCTATGCAACAACGAGA 4637
Query: 713 TCTCCCTTGGTCCTTGCCGTATGTGCTTGACGGCCCCCCATAAGACGCTCACTTGGGGAC 654
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4638 TCTCCCTTGATCCTTGCCGTATGTGCTTGACGGCCCCCCATAAGACGCTCACTTGGGGAC 4697
Query: 653 TTCTTAGTCCAGCTGTTCCAAGAGTCTCCGCTAGTTGAACCGCGTCCAGTAGACTCCCTC 594
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4698 TTCTTACTCCAGCTGTTCCAAGAGTCTCCGCTAGTTGAACCGCGTCCAGTAGACTCCCTG 4757
Query: 593 TTCCGCTCATCCCCTTCGTCAGCTCTTTGATCGGGATACTATTACCTAGGTTCCTAAACT 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4758 TTCCGCTCATCCCCTTCGTCAGCTCTTTGATCGGGATACTATTACCTAGGTTCCTAAACT 4817
Query: 533 TGGAATGGATGGCGGAGCGTAGGTGGCAAGCTGTTATATGGATACGGTGCTTTGCCCGTA 474
| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 4818 TTGAATGGATGGCGGAGCGTAGGTGGCAAGCAGTTATATGGATACGGTGCTTTACCCGTA 4877
Query: 473 GACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGCCCTCGGAGGGACTTCCCGAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 GACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGCCCTCGGAGGGACTTCCCGAA 4937
Query: 413 TGACCGTACCGAGGAATTCTACCGCACTCCGTGCAGCTATGGTTGTTGATCCTGCAGAGT 354
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4938 TGACCGTACCGAGGAATTCTACCGTACTCCGTGCAGCTATGGTTGTTGATCCTGCAGAGT 4997
Query: 353 CTACCCAAAGGTTCAAGCCAGATTGTAGGAAGTGGGCGATACGTTTTTGTATTTCTATGA 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4998 CTACCCAAAGGTTCAAGCCAGATTGTAGGAAGTGGGCGATACGTTTTTGTATTTCTATGA 5057
Query: 293 GAAGCTCGACGGAACCCACGATTCCCAGTAGTAAGTTGTCGGCATATCGCGCGTAAAAAA 234
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 5058 GAAGCTCGACGGAACCCACGATTCCCAGTAGTAAGTCGTCGGCATATCGCGCGTAACAAA 5117
Query: 233 TCCTTATTAAGTAATAGGTTTTTAAGGGGGCCGGCTTACGGGCCAGACCTCTCTCTGACC 174
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 5118 TCCTTATTAAGTAATAGGTTTTTAAGGGGGCCAGCTTACGGGCCAGGCCTCTCTCTGACC 5177
Query: 173 TGATAACTAGTATCGCCTCCCCGCCCAGCTCTATCAGCGGGCCCTTCCTTTTGCAATACT 114
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5178 TGATAACAAGTATCGCCTCCCCGCCCAGCTCTATCAGCGGGCCCTTTCTTTTGCAATACT 5237
Query: 113 TAAAAGAGTCTCTCATGGCCCAATTATTATTACAGCGTTCTCTACCATAGAATTCGGACT 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5238 TAAAAGAGTCTCTCATGGCCCAATTATTATTACAGCGTTCTCTACCATAGAATTCGGACT 5297
Query: 53 TCTGGGTAAACCCGGCGGCTTCTATGAAGAAGGCGGCGCAAAGGAGGCTCGAG 1
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5298 TCCGGGTAAACCCGGCGGCTTCTATGAAGAAGGCGGCGCAAAGGAGGCTCGAG 5360
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597