BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig209
         (1202 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1453.6    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1453.56 bits (733.0), Expect = 0.0
Identities = 789/808 (98%)
Strand = Plus/Minus

Query: 1202   CACCTGCACAAGCACACGGTACTATACTAATGGAAGCCCTACCTACCGAGGAACCACATG 1143
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119501 CACCTGCACAAGCACACGGTACTATACTAATGGAAGCCCTACCTACCGAGGAACCACATG 119560

Query: 1142   AAACGAAGAATAAAACTTAAAACTCGATAGAATGCAATGTAAGGGTTACGACGGATGGGA 1083
              |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 119561 AAACGAAGAATAAAACTTCAAACTCGCTAGAATGCAATGTAAGGGTTACGACGGATGGGA 119620

Query: 1082   CCTTAATAAGGCAATTTCTAAGATAAGACGGACGACTCGGCTGCCTTCCCCGCTAAAAAT 1023
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119621 CCTTAATAAGGCAATTTCTAAGATAAGACGGACGACTCGGCTGCCTTCCCCGCTAAAAAT 119680

Query: 1022   CTTTCCCGACGGTCGCTCAAGCACTTTCACGCAACAAGAAAGCAAAGCCTATCGTATCTC 963
              |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 119681 CTTTCCCGACGGTCGCTCAAGCACTTTCACGCAACAAGAAAGCAAAGCGTATCCTATCTC 119740

Query: 962    GCGCCATCTGAATAGGTTTCAAAGCAAGCAGTACGGCGCAACAGAGGAGCCCATTCAGTA 903
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119741 GCGCCATCCGAATAGGTTTCAAAGCAAGCAGTACGGCGCAACAGAGGAGCCCATTCAGTA 119800

Query: 902    TCGTCTTTGTTTTAGAATATTAATGCGTCCTGTCTTCATGTTGTATTATTCCCATTGACT 843
              ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119801 TCGTCTTTGTTTGTGAATATTAATGCGTCCTGTCTTCATGTTGTATTATTCCCATTGACT 119860

Query: 842    GTGACCAAACTGCGTTCCGAGTGTCTTTGTAGAGAAGAGATAAATCTTCCCCTAAGATAG 783
              |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 119861 GTGACCAAACTGCGTTCCGAGTGTCTTTGTAGAGAAGAGAGAAATCTTCCCCTAAGATAG 119920

Query: 782    TCAGGGATAAACCGCTCTACAGAACAGGGAACAGGAAGGAAAGTAAAAACCCCCGATAAG 723
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 119921 TCAGGGATAAACCGCTCTACAGAACAGGGAACAGGAAGGAAAGTCAAAACCCCCGATAAG 119980

Query: 722    AAAAAGCAATCAGCCGCTGTCACCGACCGGGACTCAGATCGGATGGTGGAGTACTATTCT 663
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119981 AAAAAGCAATCAGCCGCTGTCACCGACCGGGACTCAGATCGGATGGTGGAGTACTATTCT 120040

Query: 662    ACCACAACGAGACAGGTATCATCGAATCGAAGGCCGAATAGAAAGCATTCCCCCCAGTTA 603
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120041 ACCACAACGAGACAGGCATCATCGAATCGAAGGCCGAATAGAAAGCATTCCCCCCAGTTA 120100

Query: 602    AGAGTGCTTCTGCCCCGCCAACAGC------GTCTCCCCAGGTGCTCATGTTACTTAACA 549
              |||||||||||||||||||||||||      |||||||||||||||||||||||||||||
Sbjct: 120101 AGAGTGCTTCTGCCCCGCCAACAGCTCTCCGGTCTCCCCAGGTGCTCATGTTACTTAACA 120160

Query: 548    AAAAAGCATGAAAATGATGACGTAGGGTGGAAACCCTTCGTGACTGCAATCGTACGTTTT 489
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120161 AAAAAGCATGAAAATGATGACGTAGGGTGGAAACCCTTCGTGACTGCAATCGTACGTTTT 120220

Query: 488    CGTCTTAAGAGAAACAACCTCTGAATCCGGTTTTGTCATTAGGATAGGAGGGAAATCGAC 429
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 120221 CGTCTTAAGAGAAACAACCTCTGAATCCGGTTTTGTCATTAGGATAGGAGGGAAATCGGC 120280

Query: 428    AGCTCGACGGAGAGCTTGCCCGGCCGCC 401
              |||||||||| ||||||||||| |||||
Sbjct: 120281 AGCTCGACGGGGAGCTTGCCCGCCCGCC 120308



Score = 329.564 bits (166.0), Expect = 3.16199e-91
Identities = 274/309 (89%)
Strand = Plus/Plus

Query: 9      TGGACACTAAGGTTAGTTTCCATAGGGCGAAGCGGCGACCTCATTCATTCATTCTAACAA 68
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170110 TGGACACTAAGGTTAGTTTCCATAGGGCGAAGCGGCGACCTCATTCATTCATTCTAACAA 170169

Query: 69     C----TCATTGCCCTATTTTATCTAGATCTAGTCTATATAATGATAATGACCGAGACCCG 124
              |    |||||||||||||||||||||      ||| |||||| |      ||||||||||
Sbjct: 170170 CCAACTCATTGCCCTATTTTATCTAG------TCTCTATAATTA------CCGAGACCCG 170217

Query: 125    TACATA---AGGTCGTTCTAGCTTATATCCCTCTAAGGAAGTCTGAGCTCCTTCCCATGC 181
              ||||||   || | |||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 170218 TACATACAAAGATAGTTCTAGCTTATCTCCTTCTAAGGAAGTCTGAGCTCCTTCCCATGC 170277

Query: 182    TAAGAGCCTTTCTAAACTCTTGAACTTAAGAGAGGCTTCTTTTCAAGCTGATGAGTAGAA 241
              ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 170278 TAAGAGCCTTTCTAAACTCTTGAACTTAAGAGAGGCTTCTTTTCAAGC---TGAGTAGAA 170334

Query: 242    ATTGAGTATAAAGAAAATGACAAAAGAAATCTCACACGGAGATCAGTGTACCCATAGATC 301
              ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||| || 
Sbjct: 170335 ATATCGTATAAAGAAAATGACAAAAGAAATATCACACGGAGATCAGTGTACCCATATATT 170394

Query: 302    TATATGAAA 310
               ||||||||
Sbjct: 170395 GATATGAAA 170418


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597