BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig200
(982 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 817.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 817.223 bits (412.0), Expect = 0.0
Identities = 456/471 (97%)
Strand = Plus/Plus
Query: 1 GCAGCTCTTTCAACTGCCGCCTAATCCCCCAACATGCTCAAGAACCGAGAGCCGTCCAGG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325907 GCAGCTCTTTCAACTGCCGCCTAATCCCCCAACATGCTCAAGAACCGAGAGCCGTCCAGG 325966
Query: 61 GACTG-----CCGGAGGGAGCTTGCTTATAGAAAGAAGATAGGCC------AGAAAAACA 109
||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325967 GACTGGACGGCCGGAGGGAGCTTGCTTATAGAAAGAAGATAGGCCGGTCAAAGAAAAACA 326026
Query: 110 AGGTGCAACGGGCTCTCCGCTCCTAGTCACTAAGAAGTGCTATTCTGTCCTCCGGGGGAC 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326027 AGGTGCAACGGGCTCTCCGCTCCTAGTCACTAAGAAGTGCTATTCTGTCCTCCGGGGGAC 326086
Query: 170 TGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGCCCGTTTCATTTCCGTA 229
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326087 TGGACTCCACCAAGAGGTTCTTTCTCTCACGTAATTTCGCCCGCCCCTTTCATTTCCGTA 326146
Query: 230 CCGGAGGAAATGGGATTCGAACCCATGATACAATCTTCTTGTATGTCGATTTAGCAAACC 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326147 CCGGAGGAAATGGGATTCGAACCCATGATACAATCTTCTTGTATGTCGATTTAGCAAACC 326206
Query: 290 AATGCCTTAAGCCACTCAGCCATACCTCCAAGTTGTTGATCGGAATGGAATTGGATGTGC 349
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326207 AATGCCTTAAGCCACTCAGCCATACCTCCAAGTTGTTGATCGGAATAGAATTGGATGTGC 326266
Query: 350 CGGGTTTGGTTGCTTGCCCGAAGGAAGGGCTATCTGATCCGATCAACTACGTAAGCCGTA 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326267 CGGGTTTGGTTGCTTGCCCGAAGGAAGGGCTATCTGATCCGATCAACTACGTAAGCCGTA 326326
Query: 410 GCGCGCTAGCGCGCGTACTCTTCCTCTATGAGCGAGACTCCATCCAAATCT 460
|||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 326327 GCGCGCTAGCGCGCGTACTCTTCCTCTATGAGCGAGACTCTATCCAGATCT 326377
Score = 815.24 bits (411.0), Expect = 0.0
Identities = 479/505 (95%)
Strand = Plus/Plus
Query: 440 AGCGAGACTCCATCCAAATCTGCCACTCCTTGGGCGAGGCCTTCTGTTCTATGAACACCC 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326403 AGCGAGACTCCATCCAAATCTGCCACTCCTTGGGCGAGGCCTTCTGTTCTATGAACACCC 326462
Query: 500 CACCACTGAATGATTCACTTTCAAGTTCTCGCCTCCGACCCGGGAGAACACAGGGTCAAG 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326463 CACCACTGAATGATTCACTTTCAAGTTCTCGCCTCCGACCCGGGAGAACACAGGGTCAAG 326522
Query: 560 CCAAGCCCTGACCCGCCTAAATGGAATTCATATCTCCTTCGTCTGGTCGAGAAGGGAGGG 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326523 CCAAGCCCTGACCCGCCTAAATGGAATTCATATCTCCTTCGTCTGGTCGAGAAGGGAGGG 326582
Query: 620 GAACTGGACTCTGCCTCTTCTATTACATTTACATTACATTACGGAGAAGTCCATTCTCGT 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326583 GAACTGGACTCTGCCTCTTCTATTACATTTACATTACATTACGGAGAAGTCCATTCTCGT 326642
Query: 680 CATGATCGATCCACGTCCTAGCGTAGTGCCCGGCTTGCTTAGCAACCAAAGCTAGCTTAC 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326643 CATGATCGATCCACGTCCTAGCGTAGTGCCCGGCTTGCTTAGCAACCAAAGCTAGCTTAC 326702
Query: 740 TAAGGTAGTTTACTTTTTCATTTTGAAAAAAGAAGGCGAAGGGATTTTTCCTTGATTGCA 799
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326703 TAAGGTAGTTTACTTTTTCATTTTGAAAAAAGAAGGCGAAGGCATTTTTCCTTGATTGCA 326762
Query: 800 CGAGCTAGCCAGCAAGCCAGCAAANNNNNNNNTTACTCACCTCAACATCTATNNNNNNNG 859
|||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 326763 CGAGCTAGCCAGCAAGCCAGCAAA-CCCCCCCTTACTCACCTCAACATCTATAAAAAGAG 326821
Query: 860 CTCTTTCTCCTTTTCATTTCATAATAATAANGGNAAGCATCCAGCTCTCGATCCANAGCT 919
||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||
Sbjct: 326822 CTCTTTCTCCT-----TTTCATAATAATAA-GGTAAGCATCCAGCTCTCGATCCAGAGCT 326875
Query: 920 ACTGCTTCAAGAATCANCTGANCTC 944
|||||||||||||||| |||| |||
Sbjct: 326876 ACTGCTTCAAGAATCAACTGAGCTC 326907
Score = 67.8929 bits (34.0), Expect = 1.52099e-12
Identities = 34/34 (100%)
Strand = Plus/Plus
Query: 711 GGCTTGCTTAGCAACCAAAGCTAGCTTACTAAGG 744
||||||||||||||||||||||||||||||||||
Sbjct: 311918 GGCTTGCTTAGCAACCAAAGCTAGCTTACTAAGG 311951
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597