BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig198
(2176 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 3931.5 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 3931.5 bits (1983.0), Expect = 0.0
Identities = 2098/2149 (98%)
Strand = Plus/Minus
Query: 2149 GAGAGCCGTGTGATGGGTGACTATCCAGCACGGTTCGGAGAGCACTTTTAGTCTGCGCTG 2090
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153930 GAGAGCCGTGTGATAGGTGACTATCCAGCACGGTTCGGAGAGCACTTTTAGTCTGCGCTG 153989
Query: 2089 GTGAATGGAAGNNNNNNNTATCAAGCAAGAAGGAAGCGGCTCTTCCCACGGCGGAGTCAC 2030
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153990 GTGAATGGAAGCCCCCCCTATCAAGCAAGAAGGAAGCGGCTCTTCCCACGGCGGAGTCAC 154049
Query: 2029 CATTGACTCTATTTATTATTATGGTAAATCAGTGTATCAAGATGTCAATCTGAGATCTTA 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154050 CATTGACTCTATTTATTATTATGGTAAATCAGTGTATCAAGATGTCAATCTGAGATCTTA 154109
Query: 1969 TTTCGGTTCGATACGTCCACCTACGAGACTCACCTTTGGCTTTCGTCTCGGTAGGTGTAT 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154110 TTTCGGTTCGATACGTCCACCTACGAGACTCACCTTTGGCTTTCGTCTCGGTAGGTGTAT 154169
Query: 1909 TATTATACATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGACG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154170 TATTATACATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGACG 154229
Query: 1849 ACTGAAACGACGCGAAAAATCCAGACCCGTAAAGGAGAAGGGCCGGTGGGGGGCATTTGG 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154230 ACTGAAACGACGCGAAAAATCCAGACCCGTAAAGGAGAAGGGCCGGTGGGGGGCATTTGG 154289
Query: 1789 GAAAGTCGGGCCGATCGGGTGTCTTCATTCAAGCGACGGTACAGAAGAAGAACGAAACGA 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154290 GAAAGTCGGGCCGATCGGGTGTCTTCATTCAAGCGACGGTACAGAAGAAGAACGAAACGA 154349
Query: 1729 AGTGAGAGGCCGGGGGGCAGGGAAAAGAGTCGAGTCGATCAGGCTCGACGATCGGGAGAA 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154350 AGTGAGAGGCCGGGGGGCAGGGAAAAGAGTCGAGTCGATCAGGCTCGACGATCGGGAGAA 154409
Query: 1669 GCAAAACGAAATCAGGATTTGGCCGAAAAAGAAGCAAGGCTATGGATACCATGACCGATC 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154410 GCAAAACGAAATCAGGATTTGGCCGAAAAAGAAGCAAGGCTATGGATACCATGACCGATC 154469
Query: 1609 ACCATCGATAAAGAAGAATCTTTCTAAATCACTTCGTGTCAGCGGGGCCTTCAAGCATCC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154470 ACCATCGATAAAGAAGAATCTTTCTAAATCACTTCGTGTCAGCGGGGCCTTCAAGCATCC 154529
Query: 1549 GAAATACGCCGGGATTGAAAATGACATAGCGTTCCTGATAGAAAATGACGACTCCTTCAG 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154530 GAAATACGCCGGGATTGAAAATGACATAGCGTTCCTGATAGAAAATGACGACTCCTTCAG 154589
Query: 1489 AAAAACAAACTTATTCAAGTTCTTTTTCCCAAAGAAGTCCCGCTCCGACCGCCCGACGAG 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154590 AAAAACAAACTTATTCAAGTTCTTTTTCCCAAAGAAGTCCCGCTCCGACCGCCCGACGAG 154649
Query: 1429 TCATCTACTTAAAAGGACCCTCCCCGCAGTCCGCCCTTCCTTGAATTATTCGGTCATGCA 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154650 TCATCTACTTAAAAGGACCCTCCCCGCAGTCCGCCCTTCCTTGAATTATTCGGTCATGCA 154709
Query: 1369 ATACTTATTGAATACAAAGAAGAAAATGCATTTCGACCCCGTCGTAGTTCTCAATCATTT 1310
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 154710 ATACTTATTGAATACAAAGAACAAAATTCATTTCGACCCCGTCGTAGTTCTCAATCATTT 154769
Query: 1309 CGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCTAATGCACAGGGAAGAAG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154770 CGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCTAATGCACAGGGAAGAAG 154829
Query: 1249 CTTAGATAAAAGAATACGTTCTTGCATCGCNNNNNNNGTAGAAAGCTCGACCAGCGAGAA 1190
|||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 154830 CTTAGATAAAAGAATACGTTCTTGCATCGCTTTTTTTGTAGAAAGCTCGACCAGCGAGAA 154889
Query: 1189 AAAGTGTTTGGCCGAAGCCAAAAAGAGGGTGACCCACTTTATTCGCCAAGCGAATGATCT 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154890 AAAGTGTTTGGCCGAAGCCAAAAAGAGGGTGACCCACTTTATTCGCCAAGCGAATGATCT 154949
Query: 1129 TCGCTTCGCGGGAACAACAAAAACCACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCNN 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154950 TCGCTTCGCGGGAACAACAAAAACCACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCTT 155009
Query: 1069 NNNNNNNCCAAGGGATGGGGTTGGGGTGTATAATAACCNNNNNNNNGAGGATGCCCGGGA 1010
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 155010 TTTTTTTCCAAGGGATGGGGTTGGGGTGTATAATAACCTTTTTTTTGAGGATGCCCGGGA 155069
Query: 1009 ACAACTCCTAGGTCAATTAAGGAGAAAATGTTGGAACCTCATGGGTAAGGATAAGGTAAT 950
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 155070 ACAACTCCTAGGTCAATTAAGGATAAAATGTTGGAACCTCATGGGTAAGGATAAGGTAAT 155129
Query: 949 GGAATTGATAGAGAAATTCATAGACCTAAATAGGATAGGAGAATTGATAAGGGGAATAGA 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155130 GGAATTGATAGAGAAATTCATAGACCTAAATAGGATAGGAGAATTGATAAGGGGAATAGA 155189
Query: 889 GATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTACGGGTACAACTATTATTT 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155190 GATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTACGGGTACAACTATTATTT 155249
Query: 829 GAACGAAGTGCAAAAAATGCGATCTTTGTTGTATAATAGAACAAACACTAATACCTTAAT 770
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155250 GAACGAAGTGAAAAAAATGCGATCTTTGTTGTATAATAGAACAAACACTAATACCTTAAT 155309
Query: 769 TGAATCGGTCAAGATCAAATCTGTTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTC 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155310 TGAATCGGTCAAGATCAAATCTGTTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTC 155369
Query: 709 TTTTCAACCGAGGAACAAAACAAGATCATTTCGTTCCATTTTTAGTCAAATAGTGAAGGA 650
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 155370 TTTTCAACCGAGGAACAAAACAAGATCATTTCGTTCCATTTTTAGTAAAATAGTGAAGGA 155429
Query: 649 TATTCCATTAGTAATGAAAAAGGGGGTGGAGGGGATCCGTATATGTTGTTCAGGTCGATT 590
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 155430 TATTCCATTAGTAATGAAAAAAGGGGTGGAGGGGATCCGTATATGTTGTTCAGGTCGATT 155489
Query: 589 AGAAGGTGCAGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCGTAATGT 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155490 AGAAGGTGCAGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCGTAATGT 155549
Query: 529 ATTTAACCAGAAAATAGATTATGCTCCTGCGGAAGTATCTACTCGTTACGGAATCTCAGG 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155550 ATTTAACCAGAAAATAGATTATGCTCCTGCGGAAGTATCTACTCGTTACGGAATCTCAGG 155609
Query: 469 TGTCAAAGTGTGGATTTCATATAGTCNNNNNNNGGGGGGACGTGCTATATCCGAAACGTA 410
|||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 155610 TGTCAAAGTGTGGATTTCCTATAGTAAAAAAAAAAAGGGACGTGCTATATCCGAAACGTA 155669
Query: 409 CGAAATATAGTAAATATCGTAAAGGCAGATGTAGTAGGGGTTGCAAACCGGACGGTACAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155670 CGAAATATAGTAAATATCGTAAAGGCAGATGTAGTAGGGGTTGCAAACCGGACGGTACAC 155729
Query: 349 AACTTGGTTTTGGAAGATATGGCACTAAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAG 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155730 AACTTGGTTTTGGAAGATATGGCACTAAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAG 155789
Query: 289 CCATTGAAGCAGCGCGTCGTGCTATAATCGGACACTTCCATCGTGCTATGAGCGGACAAT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155790 CCATTGAAGCAGCGCGTCGTGCTATAATCGGACACTTCCATCGTGCTATGAGCGGACAAT 155849
Query: 229 TCCGAAGAAATGGTAAGATATGGGTAAGAGTTCTCGCAGATATCCCTATTACCGGGAAAC 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155850 TCCGAAGAAATGGTAAGATATGGGTAAGAGTTCTCGCAGATATCCCTATTACCGGGAAAC 155909
Query: 169 CTACAGAAGTAAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCGTGTGT 110
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 155910 CTACAGAAGTAAGAATGGGAAGAGGAAAGGGAAATCCTACGGGTTGGATTGCTCGTGTGT 155969
Query: 109 CCAGGGGACAAATCCTATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155970 CCAGGGGACAAATCCTATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCG 156029
Query: 49 CTACATTAGCGGCGCATAAACTATGTTCGTCAACCAAGTTTGTTCAGTG 1
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156030 CTACATTAGCGGCGCATAAACTATGTTCGTCAACCAAGTTTGTTCAGTG 156078
Score = 48.0694 bits (24.0), Expect = 3.15054e-06
Identities = 39/44 (89%)
Strand = Plus/Minus
Query: 2147 GAGCCGTGTGATGGGTGACTATCCAGCACGGTTCGGAGAGCACT 2104
||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 193082 GAGCCGTGTGATGGGAAACCTTCCCGCACGGTTCGGAGAGCACT 193125
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597