BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig193
(979 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1544.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1544.75 bits (779.0), Expect = 0.0
Identities = 856/887 (97%)
Strand = Plus/Minus
Query: 957 CCCTTGGTGGATAANTCNGACGACTCAGCAGCAGTGCGGAATTGAGTTTCTTGTCTGGTG 898
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290046 CCCTTGGTGGATAAGTCCGACGACTCAGCAGCAGTGCGGAATTGAGTTTCTTGTCTGGTG 290105
Query: 897 GATNTGATCTATAGTTAGGGGNCAATACATACCAAAAGGTTCGAAGAAGGAAGGCGCATA 838
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 290106 GATCTGATCTATAGTTAGGGGGCAATACATACCAAAAGGTTCGAAGAAGGAAGGCGCATA 290165
Query: 837 AGAGTATATAACCAACCTACCCTTCTGTATAACCTATTCACATTAGTGAAGCGGTTNGGA 778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 290166 AGAGTATATAACCAACCTACCCTTCTGTATAACCTATTCACATTAGTGAAGCGGTT-GGA 290224
Query: 777 TGCATAAGGGAAGTGCACGTTTGTGAGACCTTAGTCGGGATGCATAGGTGAGTCAACCTA 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290225 TGCATAAGGGAAGTGCACGTTTGTGAGACCTTAGTCGGGATGCATAGGTGAGTCAACCTA 290284
Query: 717 CGAGCACGGAAGAGCGTGGTACCGCTACCCCTCTCTAAGTAAAGGTAAGATTCTTAGCCC 658
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290285 CGAGCACGGAAGAGCATGGTACCGCTACCCCTCTCTAAGTAAAGGTAAGATTCTTAGCCC 290344
Query: 657 TGTAGATGACTCCATCTAAAATACAATAGGGACAGCCGTTTTCGGCTGCTCGTTTCGTAT 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290345 TGTAGATGACTCCATCTAAAATACAATAGGGACAGCCGTTTTCGGCTGCTCGTTTCGTAT 290404
Query: 597 CTTGAAGAAAGAGTAGGCTTAAGTAATGGAATAGGGGTCAGGTCAATAATAGCTATGCTA 538
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 290405 CTTGAAGAAAGAGTAGGCTTAAGTAATGTAATAGGGGTCAGGTCAATAATAGCTATGCTA 290464
Query: 537 TTGCCCTACTGATTTAAGGCCTCCGCCCGATCCCGAATGCACATTTTTTCGGGTTCATCT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290465 TTGCCCTACTGATTTAAGGCCTCCGCCCGATCCCGAATGCACATTTTTTCGGGTTCATCT 290524
Query: 477 TCAATTGATGTTTTCTTAACCTTTCGAAGACCTTGCGTAAATTTTCGATGTGGTCGGTTC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290525 TCAATTGATGTTTTCTTAACCTTTCGAAGACCTTGCGTAAATTTTCGATGTGGTCGGTTC 290584
Query: 417 TTTCTTTTGAAAAGACTACCAAATCGTCCACGTAAGGCTCGCATATGTTATGTAGGAGGT 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290585 TTTCTTTTGAAAAGACTACCAAATCGTCCACGTAAGGCTCGCATATGTTATGTAGGAGGT 290644
Query: 357 CACTGATAATTAGTGTCATCGCTCTTTGATATGTTGCACNNNNNNNNNNNNNNNNNGGGG 298
||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 290645 CACTGATAATTTGTGTCATCGCTCTTTGATATGTTGCACTTTCTTTTTCTTTTTTTTGGG 290704
Query: 297 CATATCGTAGTAAGGAAAGGGAGTGAGGGCACTCATTCGAATCGAATAGCTGAAACTACT 238
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 290705 CATATCGTAGTAAGGAAAGGAAGTGAGGGCACTCATTCGAATCGAATAGCTGAAACTACT 290764
Query: 237 ATAACTCCTATTTTTCTGCTTTAAGAGAAGCCTTCTAGCTCGTTTTAAAGCGTTGAAGAG 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290765 ATAACTCCTATTTTTCTGCTTTAAGAGAAGCCTTCTAGCTCGTTTTAAAGCGTTGAAGAG 290824
Query: 177 AGAGATAGGACATTCTAAAGATAGTTGTTGAGGAAGC----GATTTCTAACTACGAGTCC 122
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 290825 AGAGATAGGACATTCTAAAGATAGTTGTTGAGGAAGCATCTGATTTCTAACTACGAGTCC 290884
Query: 121 GTTTTCAAGCTAACTGAATGCCTATCTGCTGCTAGTTCTGTTCCACT 75
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290885 GTTTTCAAGCTAACTGAATGCCTATCTGCTGCTAGTTCTGTTCCACT 290932
Score = 57.9812 bits (29.0), Expect = 1.46056e-09
Identities = 29/29 (100%)
Strand = Plus/Plus
Query: 50 CTGACCTCTTCCTTTCTATTTAGAAAGTG 78
|||||||||||||||||||||||||||||
Sbjct: 116038 CTGACCTCTTCCTTTCTATTTAGAAAGTG 116066
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597