BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig189
(881 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 311.7 5.42328e-86
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 311.722 bits (157.0), Expect = 5.42328e-86
Identities = 255/282 (90%)
Strand = Plus/Minus
Query: 618 AGCATGAGCAACCCTTCGCGCACGAGATAGCAATGACAGGAGATTGACCGGTCGGGGTCG 559
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28734 AGCATGGGCAACCCTTCGCGCACGAGATAGCAATGACAGGAGATTGACCGGTCGGGGTCG 28793
Query: 558 AGTGATC-TCAGGGGTTTAGGGGTGCTTCTCCTGCTGCGACTACCCCCCT---CTTCTAT 503
||||||| |||||| ||||||| | ||||| |||||||||||||| | || ||||| |
Sbjct: 28794 AGTGATCCTCAGGG-TTTAGGGCTCCTTCTACTGCTGCGACTACCTCTCTTCTCTTCTCT 28852
Query: 502 TT--GAAAGGTAAAGGCCCACCAGAGAGAGGCTAGTGCTTTCATGAATGAATGCGGTAAA 445
|| |||||||||||| ||||||||||| || ||||||||||||| ||||||||||
Sbjct: 28853 TTTAGAAAGGTAAAGGACCACCAGAGAG--GCAAGTGCTTTCATGA----ATGCGGTAAA 28906
Query: 444 CCCATCAATCTTTTCGTTACATATCGGGGACAGGGAACCAGCCCAGCTAACTCGATTTCC 385
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28907 CCAATCAATCTTTTCGTTACATATCGGGGACAGGGAACCAGCCCAGCGAACTCGATTTCC 28966
Query: 384 CGAAGAAAAGAGGGGGCGCTCTTCCAATATTGAGCTCCTAGC 343
|||||||||||| ||||||||||| |||||| ||||||||||
Sbjct: 28967 CGAAGAAAAGAGAGGGCGCTCTTCTAATATTTAGCTCCTAGC 29015
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597