BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig181
         (917 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1503.1    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1503.12 bits (758.0), Expect = 0.0
Identities = 839/872 (96%)
Strand = Plus/Plus

Query: 1      TTGGTAGCTGAAAGAAAGCTGTTCGTGAAGGTCAGGCCAGAGCATAAGGAAGGAAGCTCA 60
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 349104 TTGGTAGCTGAAAGAAAGCTGTTCGTGAAGGTCAGACCAGAGCATAAGGAAGGAAGCTCA 349163

Query: 61     CTCAGAAGCGAATTCCGACTACTATTTTAGAGTACCGAAGCTCAATGGCATTGATCACAC 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349164 CTCAGAAGCGAATTCCGACTACTATTTTAGAGTACCGAAGCTCAATGGCATTGATCACAC 349223

Query: 121    CTACGGCCAGAAGAAAGAAAATACCTAGCGCCCCGGTCCCTCCATTGACTGACTGGCTTA 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349224 CTACGGCCAGAAGAAAGAAAATACCTAGCGCCCCGGTCCCTCCATTGACTGACTGGCTTA 349283

Query: 181    GAGGGCATTCCGCACAATGACCAGTGCAATTCGCGCATCTGTCGGTAGAGGGTTCAGATA 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349284 GAGGGCATTCCGCACAATGACCAGTGCAATTCGCGCATCTGTCGGTAGAGGGTTCAGATA 349343

Query: 241    AAGTAAGTAGCTCGCAAAGAGGGAGTTCCCTGGCTGGTACCAATAGATAGAGCTACTAGT 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349344 AAGTAAGTAGCTCGCAAAGAGGGAGTTCCCTGGCTGGTACCAATAGATAGAGCTACTAGT 349403

Query: 301    AAGATAAGCAAAGGCGGTTGAGAGTGGAAGGAGTTAACCTCTCAGCCTCAAGGTGAAAAA 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349404 AAGATAAGCAAAGGCGGTTGAGAGTGGAAGGAGTTAACCTCTCAGCCTCAAGGTGAAAAA 349463

Query: 361    ATATAGCAACTGACAAGGAGTAGCTGTATAGGTACCAGTTAGGGTGCCAATCTAGTATAG 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349464 ATATAGCAACTGACAAGGAGTAGCTGTATAGGTACCAGTTAGGGTGCCAATCTAGTATAG 349523

Query: 421    CACTGCTAACAGGACGGTCAGTCGATAGCGAAAGCAAAACTTCTCACATCTCTATGACTC 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349524 CACTGCTAACAGGACGGTCAGTCGATAGCGAAAGCAAAACTTCTCACATCTCTATGACTC 349583

Query: 481    TTTGTTCTCATGACCTCAAAATGATTGACTACATTCAATATAAAGGAGAAAAAAGGATTT 540
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 349584 TTTGTTCTCATGACCTCAAAGTGATTGACTACATTCAATATAAAGGAGAAAAAAGGATTT 349643

Query: 541    ATCCCCCTATTCAACTACCCATCCAAGAGCATTTGGCTTCAGAATANNNNNNNNNNNNNN 600
              ||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct: 349644 ATCCCCCTATTCAACTACCCATCCAAGAGCATTTGGCTTCAGAATACTTTATTCTTTTTA 349703

Query: 601    NNNNNNNATGGACTGCATAAATCTTATCTTCCAGCCCAAAGGAGGATAATCTCTTTTGGC 660
                     |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 349704 TTTTTCTATGGACTGCATAAATCTTCTCTTCCAGCCCAAAGGAGGATAATCTCTTTTGGC 349763

Query: 661    AGCTCAATCCTCACGGTAATAATTATGCCAATTCTGCCTAAAAATCTCTTCAGGTGATCA 720
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349764 AGCTCAATCCTCACGGTAATAATTATGCCAATTCTGCCTAAAAATCTCTTCAGGTGATCA 349823

Query: 721    AGGGGGCTCCCTTTTTCAGTAGATGAGATTAGGATGAAAGGTATTATCTCAACGCCTCTT 780
              |||||||||||||||||||||||||||||| |||  ||||||||||||| ||||| ||||
Sbjct: 349824 AGGGGGCTCCCTTTTTCAGTAGATGAGATTCGGAGAAAAGGTATTATCTAAACGCTTCTT 349883

Query: 781    TTCTCTGGCTTGCTCTTTCAAATCCAATTTTGGCCTGCAGTAATGTAATCGGGATTTCAT 840
              |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 349884 TTCTCTGGCTTGCTCTTTCAAATAAAATTTTGGCCTGCAGTAATGTAATCGGGATTTCAT 349943

Query: 841    CTCCTAAATTCTTTTTTTCTATGAAAGCNAGA 872
              ||||||||||| |||||||||||||||| |||
Sbjct: 349943 CTCCTAAATTC-TTTTTTCTATGAAAGCAAGA 349975



Score = 57.9812 bits (29.0), Expect = 1.36672e-09
Identities = 29/29 (100%)
Strand = Plus/Minus

Query: 761    CCTTTCATCCTAATCTCATCTACTGAAAA 733
              |||||||||||||||||||||||||||||
Sbjct: 122857 CCTTTCATCCTAATCTCATCTACTGAAAA 122885


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597