BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig173
         (882 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1421.8    0.0

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 1421.84 bits (717.0), Expect = 0.0
Identities = 830/879 (94%)
Strand = Plus/Minus

Query: 878   TAAGCAGATCGAAAGCNCGAAAANNAANGTCTNAGCGNNNNNT-ACTCTAATTNGAAATA 820
             |||||||||||||||| ||||||  || |||| ||||     | ||||||||| ||||| 
Sbjct: 40698 TAAGCAGATCGAAAGCACGAAAAGGAATGTCTTAGCGTGCCCTTACTCTAATTCGAAATC 40757

Query: 819   CGTCTCTTTCTTTCTATTCAAATTCNTCTCCCNTNCATTCCTCGATCCGCTTGTAAATTC 760
             ||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||
Sbjct: 40758 CGTCTCTTTCTTTCTATTCTAATTCCTCTCCCTT-CATTCCTCGATCCGCTTGTAAATTC 40816

Query: 759   TTGGTGTAATACCCACTCGTAAATGATTGGTGTAAGAATTTCTCACTAATCAGGTGTGAT 700
             |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 40817 TTGGTGTAATACTCACTCGTAAATGATTGGTGTCAGAATTTCTCACTAATCAGGTGTGAT 40876

Query: 699   CAGTCTCATCCGTGTAAGAATTAGGAATTCCTCTTCCAACTCGTCCCAGAATGGGCGTTA 640
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40877 CAGTCTCATCCGTGTAAGAATTAGGAATTCCTCTTCCAACTCGTCCCAGAATGGGCGTTA 40936

Query: 639   TGGCAAAGAACAAGAAGAAAACTAAAGGAGAAATTTGTCCAATAGTAACAAAGGGTGCCT 580
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40937 TGGCAAAGAACAAGAAGAAAACTAAAGGAGAAATTTGTCCAATAGTAACAAAGGGTGCCT 40996

Query: 579   CCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAATA 520
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40997 CCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAATA 41056

Query: 519   TTCCTTGGTGAATCGGGCGAAAACTTGAACTACGTACATACATACTTTTAAAAAAGGGTA 460
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41057 TTCCTTGGTGAATCGGGCGAAAACTTGAACTACGTACATACATACTTTTAAAAAAGGGTA 41116

Query: 459   AAGCCAACAGACATATAAAAACTGGTGCTATTGCGGCTACACCTCCCGATTTGTCAGGTA 400
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 41117 AAGCCAACAGACATATAAAAACTGGTGCTATTGCGGCTACACCTCCCGCTTTGTCAGGTA 41176

Query: 399   TACTACGAAGAATGGCATGGATCGGTAGGAAATACCATTCTGGCACAATATGAGGCGGGG 340
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41177 TACTACGAAGAATGGCATGGATCGGTAGGAAATACCATTCTGGCACAATATGAGGCGGGG 41236

Query: 339   TGGACATCGGATTAGCAGGTATATAATTGTCGGGATGCCCCAAAACATTAGGAGCATNNN 280
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 41237 TGGACATCGGATTAGCAGGTATATAATTGTCGGGATGCCCCAAAACATTAGGAGCATAAA 41296

Query: 279   NNNNNNNNNNNNNNNNNNNGATAGCAAAAGCTACCCAACCTACTAGATCCTTTACATAAA 220
                                |||||||||||||||||||||||||||||||||||||||||
Sbjct: 41297 AAATCCAAATGGAAAAAAAGATAGCAAAAGCTACCCAACCTACTAGATCCTTTACATAAA 41356

Query: 219   AATAAGGGTAAGAAGCAATTTTATCCATCTCTGAATGTACACCCAATGGATTATTGGATC 160
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41357 AATAAGGGTAAGAAGCAATTTTATCCATCTCTGAATGTACACCCAATGGATTATTGGATC 41416

Query: 159   CATATTGATGCAATGCGGCCAGATGAAGAAGACTGGCGCCTACTAAAATAAAGGGGAGTA 100
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41417 CATATTGATGCAATGCGGCCAGATGAAGAAGACTGGCGCCTACTAAAATAAAGGGGAGTA 41476

Query: 99    AATGATGAAGACTNNNNNNNCGATTTAAGGTGGCATTGTCCACGGAGAACCCACCCCAAA 40
             |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 41477 AATGATGAAGACTAAAAAAACGATTTAAGGTGGCATTGTCCACGGAGAACCCACCCCAAA 41536

Query: 39    GCCAAGTCACTATGGTATCTCCTACTACAGGTATGGCGC 1
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 41537 GCCAAGTCACTATGGTATCTCCTACTACAGGTATGGCGC 41576


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597