BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig168
         (971 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 331.5    6.4517e-92

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 331.546 bits (167.0), Expect = 6.4517e-92
Identities = 176/179 (98%)
Strand = Plus/Minus

Query: 179    CAGTCCACTAACAGCGGTATACAGTAAGTCAGTATAAGTCAGTACAGGAAGGGCACGCGA 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250461 CAGTCCACTAACAGCGGTATACAGTAAGTCAGTATAAGTCAGTACAGGAAGGGCACGCGA 250520

Query: 119    AATAGACAACTACTTACTAGGCTAGGGTAGTCGTTTTTTCATCTTCCCTTTATTTTACTT 60
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 250521 AATAGACAACTACTTACTAGGCTAGGGTAGTAGTTTTTTCATCTTCCCTTTATTTTACTT 250580

Query: 59     TACCCTAGTGGAAATTCTTTTTTCAAAGTTACTAGGTAATTAGTGAAGAGGTTTATAAA 1
              ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 250581 TACCCTAGTGGAAATTCATTTTTAAAAGTTACTAGGTAATTAGTGAAGAGGTTTATAAA 250639


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597