BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig167
(945 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 644.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 644.758 bits (325.0), Expect = 0.0
Identities = 433/476 (91%)
Strand = Plus/Plus
Query: 474 GATCAGATCTACCAGCGACCGGTTTACGGAACAAGGAGTTAAGCAAGGGCCAGGAGATTG 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228201 GATCAGATCTACCAGCGACCGGTTTACGGAACAAGGAGTTAAGCAAGGGCCAGGAGATTG 228260
Query: 534 ATAAAAGAACCTGGCCGAAGTAAGTCTTGTGTTCAATTCCGCGGTTGGAAGGATTTCTTT 593
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 228261 ATAAAAGAACCTGGCCGAAGTCAGTCTTGTGTTCAATTCCGCGGTTGGAAGGATTTCTTT 228320
Query: 594 CTGCCATCTGTCTTTCCCTTCTCTCTCTTCTCTTAGCAAAGGTAGGTGAAAGTCAAAC-- 651
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 228321 CTGCCATCTGTCTTTCCCTTCTCTCTCTTCTCTTAGCAAAGGTAGGTTCAAGTCAAACTT 228380
Query: 652 --CTTTGGCTTGCGGGCTCAGGGACTGCAGTCAGCTGCTTCCCCTGTAGCCGTCAGCTCG 709
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 228381 TTTTTTGGCTTGCGGGCTCGGGGACTGCAGTCAGCTGCTTCCCTTGTAGTCGTCAGCTCG 228440
Query: 710 TTCTTGACAGATCCGATCGGGTGTTCATAATCTGGAGTAAAAGGATTCGAACCTTTGCAT 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228441 TTCTTGACAGATCCGATCGGGTGTTCATAATCTGGAGTAAAAGGATTCGAACCTTTGCAT 228500
Query: 770 GCCGGTACCAAAAACCGATGCCTTACCACTTGGCTATACTCCATAGGCCTGTTTTGGANG 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228501 GCCGGTACCAAAAACCGATGCCTTACCACTTGGCTATACTCCATAGGCCTGTTTTGGAC- 228559
Query: 830 GGTANGAACNNNNNNNNNNNNAAGGGANAAGCAGGNCTCGAANAACGAGCCGAGCCGNGC 889
|||| |||| |||||| ||||||| |||||| || ||||||| ||
Sbjct: 228560 GGTAGGAACGGGGAGAGGGGGAAGGGAGAAGCAGGGCTCGAAGAA-----CGAGCCGTGC 228614
Query: 890 ANGGACNCGGGGATATAGCAAGTAAGCAGCANGNTNNTCCCCTTAGNANCGACTAC 945
| |||| |||||||||||||||||||||||| | | ||||||||| | |||||||
Sbjct: 228615 AAGGACGCGGGGATATAGCAAGTAAGCAGCAAGGTTCTCCCCTTAGGACCGACTAC 228676
Score = 511.94 bits (258.0), Expect = 3.11631e-146
Identities = 270/274 (99%)
Strand = Plus/Plus
Query: 190 TGTTAAGATATTCTTAATGATATTCGGGCTTCTACCCAGCAGAGTCTTCCATAACTGACC 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139311 TGTTAAGATATTCTTAATGATATTCGGGCTTCTACCCAGCAGAGTCTTCCATAACTGACC 139370
Query: 250 GACCGGTGAAAGGATAGCCGGACCCGTTGAAAGCCGGCAGTTATTGATGGCTTGGAAAGA 309
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 139371 GACCGGTGAAAGGATAGCCGGACCCGTTGAAAGCCGGCAGTTATTGATGGCTCGGAAAGA 139430
Query: 310 AAGCTGGGCTAGGTCTTCTTCCCTTAGAGAGGCTTATTCTCCTTTCCCGAGTTCTCAAAT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139431 AAGCTGGGCTAGGTCTTCTTCCCTTAGAGAGGCTTATTCTCCTTTCCCGAGTTCTCAAAT 139490
Query: 370 ATTTGCTTTTGTCTCTGTTTATTCTATTATTAGTTCTATTGTTCCGATCCGCTTGTGTTT 429
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139491 ATTTTCTTTATTCTCTGTTTATTCTATTATTAGTTCTATTGTTCCGATCCGCTTGTGTTT 139550
Query: 430 CAGGAAATCAAACCGAAGTCAATTCATTCAACAA 463
||||||||||||||||||||||||||||||||||
Sbjct: 139551 CAGGAAATCAAACCGAAGTCAATTCATTCAACAA 139584
Score = 153.134 bits (77.0), Expect = 3.19915e-38
Identities = 80/81 (99%)
Strand = Plus/Plus
Query: 14 AGTAGTTAAACGGGCAGGAGATAATAACAGAATAATTGTGTGCACTGGTGGACCTAATAC 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 139148 AGTAGTTAAACGGGCAGGAGATAATAACAGAATAATTGTGTGCACTGGTGGACCTTATAC 139207
Query: 74 TTATGTACCCGGGCTAGCGCC 94
|||||||||||||||||||||
Sbjct: 139208 TTATGTACCCGGGCTAGCGCC 139228
Score = 85.7341 bits (43.0), Expect = 6.22971e-18
Identities = 43/43 (100%)
Strand = Plus/Plus
Query: 121 AGCAGAATGCTATCTGTTCTTATTCATATATTACCTTCCATTA 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139239 AGCAGAATGCTATCTGTTCTTATTCATATATTACCTTCCATTA 139281
Score = 65.9106 bits (33.0), Expect = 5.78027e-12
Identities = 33/33 (100%)
Strand = Plus/Minus
Query: 480 TCTGATCCGAACAGATCTTGTTGAATGAATTGA 448
|||||||||||||||||||||||||||||||||
Sbjct: 272127 TCTGATCCGAACAGATCTTGTTGAATGAATTGA 272159
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597