BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig161
(975 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 868.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 868.764 bits (438.0), Expect = 0.0
Identities = 461/470 (98%)
Strand = Plus/Plus
Query: 495 AGAGGAGGGCATGGAAATTTGACTTTGATGGCACGACTAATCAAAATGGGTACGGAGTAG 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270043 AGAGGAGGGCATGGAAATTTGACTTTGATGGCACGACTAATCAAAATGGGTACGGAGTAG 270102
Query: 555 GGGCATTGCTGATTGCACCTGATGAATCGCACACCCCCATTGCCATTAAGCGGAACTTTT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270103 GGGCATTGCTGATTGCACCTGATGAATCGCACACCCCCATTGCCATTAAGCGGAACTTTT 270162
Query: 615 AAGGAACTAAGAATACCACTGAAGATGAAGCATGTATCCATGGATTAAAGACTGCCTTGA 674
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 270163 AAGGAACTAAGAATACCACAGAAGATGAAGCATGTATCCATGGATTAAAGACTGCCTTGA 270222
Query: 675 CCCTGGGAATATAAGAAATCGAAGTATTTAGGGATTCGACGCTTATCATCTGCCAAACTC 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270223 CCCTGGGAATATAAGAAATCGAAGTATTTAGGGATTCGACGCTTATCATCTGCCAAACTC 270282
Query: 735 AAAAGAAATGAAAAACCAAATATGAAAAACTTTTGACATACCATGCTTATCTTGAAAAGC 794
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270283 AAAAGAAATTAAAAACAAAATATGAAAAACTTTTGACATACCATGCTTATCTTGAAAAGC 270342
Query: 795 TCACTGAGCAATTCAAGAAAATAAGTTTCTCTCCACTACCCAGAGAAAAAAGAAGTTCGC 854
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 270343 TCACTGAGCAATTCAAGAAAATCAGTTTCTCTCCACTACCCAGAGAAAAAAGAAGTTCGC 270402
Query: 855 GGATGCATTGGCAACACTGGCCTCCATGATAAACATTCCTGAGGGAAAGTCCGCCCAATC 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270403 GGATGCATTGGCAACACTGGCCTCCATGATAAACATTCCTGAGGGAAAGTCCGCCCAATC 270462
Query: 915 ATGATAGAACAAAGAAGCAGCCCGGNGTATTGCANCCNAANAGAAATTTT 964
||||||||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 270463 ATGATAGAACAAAGAAGCAGCCCGGTGTATTGCAACCTAATTGAAATTTT 270512
Score = 787.487 bits (397.0), Expect = 0.0
Identities = 444/463 (96%)
Strand = Plus/Plus
Query: 17 TCCATTCTAGTGCCTACAACGCCAGGAAGCCTTTATTACTATACCTATCGGTCACTGAAA 76
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 269587 TCCATTCTAGTGCCTACAACGCCAGGAAGCCTTTATTACTATACCTATCAGTCACCGAAA 269646
Query: 77 CCACTATGGGGTCTATGTTGGCTTAATACGATGAAGACAGACGGAAGTAAAGGGCCATAT 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269647 CCACTATGGGGTCTATGTTGGCTTAATACGATGAAGACAGACGGAAGTAAAGGGCCATAT 269706
Query: 137 ACTACCAACGTAAGAAAATGACTGACTACAAGACCAGGTATACCAATTTTGAGAAAACCT 196
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 269707 ACTACCAACGTAAGAAAATGACTGACTACAAGACCAGGTATACCAATTTGGAGAAAACCT 269766
Query: 197 GCTTGGC--------GGGTAAGGCGGAAATTGAGGCATTACATGCTGTCTTACCCAGTAC 248
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269767 GCTTGGCTTTGGTTTGGGTAAGGCGGAAATTGAGGCATTACATGCTGTCTTACCCAGTAC 269826
Query: 249 ATTTAATAGCTTCCATGGACCTACNNNNNNNGTATTTGTTCGAGAAACCCGCCTTAACGT 308
|||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 269827 ATTTAATAGCTTCCATGGACCTACAAAAAAAGTCTTTGTTCGAGAAACCCGCCTTAACGT 269886
Query: 309 AACGGGAAGGACCGCAAGATGGTTACTGCTTCTGTCTGAATTCGACATCACGTATGTAAC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269887 AACGGGAAGGACCGCAAGATGGTTACTGCTTCTGTCTGAATTCGACATCACGTATGTAAC 269946
Query: 369 CAAAAAGGAAGGGCGATAGCAGAACACCTTGCACCCTATCAAGGAGGAACATGAGTTTAA 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269947 CAAAAAGGAAGGGCGATAGCAGAACACCTTGCACCCTATCAAGGAGGAACATGAGTTTAA 270006
Query: 429 GGATTGCTTCCCAGACGAGGAAATAGCTGTCACAGAAGAGGAG 471
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270007 GGATTGCTTCCCAGACGAGGAAATAGCTGTCACAGAAGAGGAG 270049
Score = 65.9106 bits (33.0), Expect = 5.96653e-12
Identities = 36/37 (97%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCAGCTCCTCT 465
|||||||||||| ||||||||||||||||||||||||
Sbjct: 227971 CTCCTCTCCTTAGAGTCAAGTGGCTTTCAGCTCCTCT 228007
Score = 65.9106 bits (33.0), Expect = 5.96653e-12
Identities = 36/37 (97%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCAGCTCCTCT 465
||||||| |||||||||||||||||||||||||||||
Sbjct: 298334 CTCCTCTGCTTACAGTCAAGTGGCTTTCAGCTCCTCT 298370
Score = 63.9282 bits (32.0), Expect = 2.3576e-11
Identities = 35/36 (97%)
Strand = Plus/Plus
Query: 465 AGAGGAGCTGAAAGCCACTTGACTGTAAGGAGAGGA 500
|||||||||||||||||||||||| |||||||||||
Sbjct: 230162 AGAGGAGCTGAAAGCCACTTGACTCTAAGGAGAGGA 230197
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 66440 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 66468
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 84279 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 84307
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 128508 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 128536
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 285779 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 285807
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Plus
Query: 473 TGAAAGCCACTTGACTGTAAGGAGAGGAG 501
|||||||||||||||||||||||||||||
Sbjct: 296943 TGAAAGCCACTTGACTGTAAGGAGAGGAG 296971
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 398913 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 398941
Score = 57.9812 bits (29.0), Expect = 1.4545e-09
Identities = 29/29 (100%)
Strand = Plus/Minus
Query: 501 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 473
|||||||||||||||||||||||||||||
Sbjct: 417190 CTCCTCTCCTTACAGTCAAGTGGCTTTCA 417218
Score = 54.0164 bits (27.0), Expect = 2.27096e-08
Identities = 33/35 (94%)
Strand = Plus/Plus
Query: 467 AGGAGCTGAAAGCCACTTGACTGTAAGGAGAGGAG 501
|||||| ||||||||||||||| ||||||||||||
Sbjct: 219070 AGGAGCGGAAAGCCACTTGACTCTAAGGAGAGGAG 219104
Score = 50.0517 bits (25.0), Expect = 3.54574e-07
Identities = 28/29 (97%)
Strand = Plus/Plus
Query: 473 TGAAAGCCACTTGACTGTAAGGAGAGGAG 501
||||||||||||||||||||||| |||||
Sbjct: 174373 TGAAAGCCACTTGACTGTAAGGAAAGGAG 174401
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597