BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig160
(700 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1193.9 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1193.87 bits (602.0), Expect = 0.0
Identities = 672/700 (96%)
Strand = Plus/Minus
Query: 700 TAGTAGCTAAAGCGTACTTGCGTGTTAAAGGGGGTACGCGGATTTGGGCTACTAAGTGGA 641
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 372908 TAGTAGCTAAAGCGTACTTGCGTGTTAAAGGGG-----CGGATTTGGGCTACTAAGTGGA 372962
Query: 640 ACCAGACCATTCAACTTGCCATTTGCACTCTCCTAGGGTGCGATCGTAGGAAGCTCTATT 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372963 ACCAGACCATTCAACTTGCCATTTGCACTCTCCTAGGGTGCGATCGTAGGAAGCTCTATT 373022
Query: 580 AGCGAATGCAATTCCCCGTCCGATAAGACTGATCATGCCCTGCTGCTTGGCTTGGAATCA 521
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 373023 AGCGAATGCAATTCCCCGCCCGATAAGACTGATCATGCCCTGCTGCTTGGCTTGGAATCA 373082
Query: 520 AACTAGCCTATCATGCCCTTTCTTCATTCCTATATGGACCCATATTCCTATGTTCTTCCA 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373083 AACTAGCCTATCATGCCCTTTCTTCATTCCTATATGGACCCATATTCCTATGTTCTTCCA 373142
Query: 460 ATGTTTACTGTATTACTGGGATTCCTATTTACTGAACCATATCAAAGAAGCTACTTTCTT 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373143 ATGTTTACTGTATTACTGGGATTCCTATTTACTGAACCATATCAAAGAAGCTACTTTCTT 373202
Query: 400 TCTGGCTTTTATACCCAGGTATAATATAAAGGGATAGACAGTCTAAGAGAGTGCCAAGAA 341
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 373203 TCTGGCTTTTATACCCAGG-----TATAAAGGGATAGACAGTCTAAGAGAGTGCCAAGAA 373257
Query: 340 AGAACACATACCTATCACTTTTGGAAGGTTTGGAACCCTCGATTCATCCGACTCAAGGAG 281
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373258 ACAACACATACCTATCACTTTTGGAAGGTTTGGAACCCTCGATTCATCCGACTCAAGGAG 373317
Query: 280 AAAAAGAGAACAAGATNNNNNNNCTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGC 221
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 373318 AAAAAGAGAACAAGATGGGGGGGCTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGC 373377
Query: 220 TCATGGGCAGCTTATCTCTAATTGGATTTCCTTATCTTTCTTCTTCAAATTACNANTTGA 161
||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 373378 TCATGGGCAGCTTATCTCTAATTGGATTTCCTTATCTTTCTTCTTCAAATTACGAGTAGA 373437
Query: 160 GATTTGGGGAGAGTGGATAGGACAGGGTGGTGGNTGACGTAAAGGAAGGGAAGGCCCATC 101
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 373438 GATTTGGGGAGAGTGGATAGGACAGGGTGGTGGATGACGTAAAGGAAGGGAAGGCCCATC 373497
Query: 100 CCGTGCTTTCGAGCGATTCTTCCCGCAAAAGGNANATCTTTTTCTTTCCGTCCCAAATAG 41
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 373498 CCGTGCTTTCGAGCGATTCTTCCCGCAAAAGGCAGATCTTTTTCTTTCCGTCCCAAATAG 373557
Query: 40 AACANNTGAATAGGGACTTAGATGTGACCAAGGTGCTTGC 1
|||| |||||||||||||||||||||||||||||||||
Sbjct: 373558 AACAATAGAATAGGGACTTAGATGTGACCAAGGTGCTTGC 373607
Score = 139.258 bits (70.0), Expect = 3.54524e-34
Identities = 70/70 (100%)
Strand = Plus/Minus
Query: 257 CTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATT 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194103 CTTGCCTCCTCGTTCCCTTTTACCTATGCCATGATGCTCATGGGCAGCTTATCTCTAATT 194162
Query: 197 GGATTTCCTT 188
||||||||||
Sbjct: 194163 GGATTTCCTT 194172
Score = 101.593 bits (51.0), Expect = 7.72428e-23
Identities = 54/55 (98%)
Strand = Plus/Minus
Query: 356 AAGAGAGTGCCAAGAAAGAACACATACCTATCACTTTTGGAAGGTTTGGAACCCT 302
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 332869 AAGAGAGTGCCAAGAAACAACACATACCTATCACTTTTGGAAGGTTTGGAACCCT 332923
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597