BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig157
(973 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1465.5 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1465.45 bits (739.0), Expect = 0.0
Identities = 761/771 (99%)
Strand = Plus/Plus
Query: 12 CCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACNNNNNNNNCAAGTGTTCTTCGGAA 71
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 108832 CCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAA 108891
Query: 72 TGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGCCGCCAAAAA 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108892 TGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGCCGCCAAAAA 108951
Query: 132 CTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGT 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108952 CTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGT 109011
Query: 192 GTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGG 251
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 109012 GTGTAGGGGTGAAATCCGGAGATCTACGAAGGAAGGCCAAAAGCGAAGGCAGCTCTCTGG 109071
Query: 252 GTCCCTACCGACGCTGAGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTA 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109072 GTCCCTACCGACGCTGAGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTA 109131
Query: 312 GTCCATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTACGCGGATCAGGGGCCCAGCTAA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109132 GTCCATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTACGCGGATCAGGGGCCCAGCTAA 109191
Query: 372 CGCGTGAAACACTCCGCCTGGGGAGTACGGTCGCAAGACCGAAACTCAAAGGAATTGACG 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109192 CGCGTGAAACACTCCGCCTGGGGAGTACGGTCGCAAGACCGAAACTCAAAGGAATTGACG 109251
Query: 432 GGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAACCTTACC 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109252 GGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAACCTTACC 109311
Query: 492 AGCCCTTGACATATGAACAAGAAAACCTGTCCTTAACGGGATGGTACTTACTTTCATACA 551
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 109312 AGCCCTTGACATATGAACAAGAAAACCTGTCCTTAACGGGATGGTACTGACTTTCATACA 109371
Query: 552 GGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAG 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109372 GGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAG 109431
Query: 612 CGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTCTTTGCAACCGAA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109432 CGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTCTTTGCAACCGAA 109491
Query: 672 GTGAGCCGAGGAGCCGAGTGACGTGCCAGCGCTACTAATTGAGTGCCAGCACCTAGCTGT 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109492 GTGAGCCGAGGAGCCGAGTGACGTGCCAGCGCTACTAATTGAGTGCCAGCACCTAGCTGT 109551
Query: 732 GCTGTCAGTAAGAAGGTAGCCGGCGCCTTTCGAAGCACTTTCTATTTCTAG 782
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109552 GCTGTCAGTAAGAAGGTAGCCGGCGCCTTTCGAAGCACTTTCTATTTCTAG 109602
Score = 141.24 bits (71.0), Expect = 1.25427e-34
Identities = 71/71 (100%)
Strand = Plus/Plus
Query: 782 GTTAGCGCTGTTTTTTGATTGCAGCTAGCGCGCTTGACTAATAAGATAGAAAGGGCCTTT 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97082 GTTAGCGCTGTTTTTTGATTGCAGCTAGCGCGCTTGACTAATAAGATAGAAAGGGCCTTT 97141
Query: 842 CTCGCTTGTTT 852
|||||||||||
Sbjct: 97142 CTCGCTTGTTT 97152
Score = 137.275 bits (69.0), Expect = 1.95834e-33
Identities = 127/151 (84%)
Strand = Plus/Plus
Query: 825 AGATAGAAAGGGCCTTTCTCGCTTGTTTAGTAAAGTCAAGTTTTTGGCCTTATCTTGC-N 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109601 AGATAGAAAGGGCCTTTCTCGCTTGTTTAGTAAAGTCAAGTTTTTGGCCTTATCTTGCAG 109660
Query: 884 NNGACGACGACNTCNAGTTGANGGCANANAAANANTCGGNNTTC-NNNNAGCCNCCCGGT 942
||||||||| || |||||| |||| | ||| | |||| ||| |||| ||||||
Sbjct: 109661 GTGACGACGACGTCGAGTTGACGGCAGAGAAAGACTCGGCATTCAGGCGAGCCACCCGGT 109720
Query: 943 GGTGNGGNNCGTANTGGGTTTAGTACNCCCC 973
|||| || |||| |||||||||||| ||||
Sbjct: 109721 GGTGTGGTACGTAGTGGGTTTAGTACGCCCC 109751
Score = 91.6812 bits (46.0), Expect = 1.04014e-19
Identities = 52/54 (96%)
Strand = Plus/Minus
Query: 864 CTTGACTTTACTAAACAAGCGAGAAAGGCCCTTTCTATCTTATTAGTCAAGCGC 811
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 354691 CTTGACTTTACTAAACAAGCAAGAAAGGCTCTTTCTATCTTATTAGTCAAGCGC 354744
Score = 85.7341 bits (43.0), Expect = 6.41707e-18
Identities = 49/51 (96%)
Strand = Plus/Minus
Query: 861 GACTTTACTAAACAAGCGAGAAAGGCCCTTTCTATCTTATTAGTCAAGCGC 811
||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 142608 GACTTTACTAAACAAGCAAGAAAGGCTCTTTCTATCTTATTAGTCAAGCGC 142658
Score = 57.9812 bits (29.0), Expect = 1.45147e-09
Identities = 32/33 (97%)
Strand = Plus/Minus
Query: 814 GCGCGCTAGCTGCAATCAAAAAACAGCGCTAAC 782
|||| ||||||||||||||||||||||||||||
Sbjct: 198931 GCGCCCTAGCTGCAATCAAAAAACAGCGCTAAC 198963
Score = 57.9812 bits (29.0), Expect = 1.45147e-09
Identities = 29/29 (100%)
Strand = Plus/Plus
Query: 197 GGGGTGAAATCCGGAGATCTACGAAGGAA 225
|||||||||||||||||||||||||||||
Sbjct: 216668 GGGGTGAAATCCGGAGATCTACGAAGGAA 216696
Score = 44.1047 bits (22.0), Expect = 2.18296e-05
Identities = 22/22 (100%)
Strand = Plus/Minus
Query: 836 CCCTTTCTATCTTATTAGTCAA 815
||||||||||||||||||||||
Sbjct: 316153 CCCTTTCTATCTTATTAGTCAA 316174
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597