BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig153
(3902 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1174.0 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1174.05 bits (592.0), Expect = 0.0
Identities = 642/659 (97%)
Strand = Plus/Minus
Query: 3557 GCTACTGACTTTATACTTCCTGTTCTATTGGAAGAGAGATGAGATTCCTTCGGGACAGAC 3498
||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341107 GCTACTGGCTTGAGACTTCCTGTTCTATTGGAAGAGAGATGAGATTCCTTCGGGACAGAC 341166
Query: 3497 TCCATTCCGAATGCCAATAAGACCACTTCCTCAATCCTGAGCATCATTTAACTCAAGAGC 3438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341167 TCCATTCCGAATGCCAATAAGACCACTTCCTCAATCCTGAGCATCATTTAACTCAAGAGC 341226
Query: 3437 CTTGCGGCACTCCCACTTCTACTGGATCTCAATCTATACACTTAGTGGAGCGCGAGCTTT 3378
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 341227 CTTGCGGCACTCCCACTTCTACTGGATCTCAATCTATACACTTAATGGAGCGCGAGCTTT 341286
Query: 3377 ATAACTATTTTCTGTGAGATGGGTGCCTTCACCTCTGTAAGAACCTTTATCTCGAAAGAG 3318
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341287 CTAACTATTTTATGTGAGATGGGTGCCTTCACCTCTGTAAGAACCTTTATCTCGAAAGAG 341346
Query: 3317 ATTAAGTAAGGCAAGTTTCTGACCATTAATTCTGTAACAAAGGAGCGTAGTGGCAGGCTC 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341347 ATTAAGTAAGGCAAGTTTCTGACCATTAATTCTGTAACAAAGGAGCGTAGTGGCAGGCTC 341406
Query: 3257 GCATAGCTAAAGCCTTCAAGTCCTATTATCGGAGAGGGACTTTTTCCATTATTTATCCTA 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341407 GCATAGCTAAAGCCTTCAAGTCCTATTATCGGAGAGGGACTTTTTCCATTATTTATCCTA 341466
Query: 3197 TTTCCGATCGGA------CCTTGCCAATTCCTTTTCTATCCCTATATTCGAATTAGCCCG 3144
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 341467 TTTCCGATCGGACCTTGCCCTTGCCAATTCCTTTTCTATCCCTATATTAGAATTAGCCCG 341526
Query: 3143 ACTTGCCATTAGAGTGTTCTTTCAGACGTTGAGAGGAAGGGACCCGCGGACACACCATCA 3084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341527 ACTTGCCATTAGAGTGTTCTTTCAGACGTTGAGAGGAAGGGACCCGCGGACACACCATCA 341586
Query: 3083 GAGCTAGATTTAGCTTTGGATCGATCAATTGCCCCAACCCCATCATCGAATGAGGTTAAG 3024
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 341587 GAGCTAGATTTAGCTTAGGATCGGTCAATTGCCCCAACCCCATCATCGAATGAGGTTAAG 341646
Query: 3023 CGCGCCTTTCGGAGACTTTGATAAAGAATGCCTTCCTTCGGCGAACGGCTAGACACTTCT 2964
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 341647 TGCGCCTTTCGGAGACTTTGATAAAGAATCCCTTCCTTCGGCGAACGGCTAGACACTTCT 341706
Query: 2963 ATAGTGGGATCTCTTGAACCTATGAAACTCGTGAAAGTGGGTGAACCCCTTGCCCCTTC 2905
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341707 ATAGTGGGATCTCTTGAACCTATGAAACTCGTGAAAGTGGGTGAACCCCTTGCCCCTTC 341765
Score = 57.9812 bits (29.0), Expect = 5.88308e-09
Identities = 39/41 (95%)
Strand = Plus/Minus
Query: 2784 AAGAAGGGGAAAA-ATAGGCGATTCGAATCCCCCTTCTTCT 2745
||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 92393 AAGAAGGGGAAAAAATAGGCGATTCGAATCCCCGTTCTTCT 92433
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597