BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig152
(1884 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 823.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 823.17 bits (415.0), Expect = 0.0
Identities = 421/423 (100%)
Strand = Plus/Minus
Query: 423 CAATTTCTAAACAACTATCGTTTGTGAATGTAGGTTGTGTCGGGGATATACTGTGGCTAG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110781 CAATTTCTAAACAACTATCGTTTGTGAATGTAGGTTGTGTCGGGGATATACTGTGGCTAG 110840
Query: 363 TAAGTCATTTCGTTTGCATTTTCTTCAACGAGACCGAAAACACAGCAATGATTTGTTTTA 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 110841 TAAGTCATTTCGTTTGCATTTTATTCAACGAGACCGAAAACACAGCAATGATTTGTTTTA 110900
Query: 303 TGGACAGTTATATTATTTCCAGCCCAAATGAGGTAGTGCCTAATGTCACCGGGAGCGAGT 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 110901 TGGACAGTTATATTATTTCCAGTCCAAATGAGGTAGTGCCTAATGTCACCGGGAGCGAGT 110960
Query: 243 TGGTAGGGGGGCCTGAGATCTTGAGAATGGATCAAGGAAATCCTGATGCTCCGCCAGCCA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110961 TGGTAGGGGGGCCTGAGATCTTGAGAATGGATCAAGGAAATCCTGATGCTCCGCCAGCCA 111020
Query: 183 TTCCTCATGCTGAACAGGCTATGGGGGATCTGGATCTAGCCTTGCGATTGGGGCCGCCGA 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111021 TTCCTCATGCTGAACAGGCTATGGGGGATCTGGATCTAGCCTTGCGATTGGGGCCGCCGA 111080
Query: 123 GCCCAACAAAAGAGGCTCTCGAAAGAGAGCTTTCGACCTTTCTTTCTTCCTTTGGAAATA 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111081 GCCCAACAAAAGAGGCTCTCGAAAGAGAGCTTTCGACCTTTCTTTCTTCCTTTGGAAATA 111140
Query: 63 GGGAAGTTAGAAGGGATGTCTTGGAAGGGACAATAAGGAAACTCGACTTGAACAGCGCGT 4
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111141 GGGAAGTTAGAAGGGATGTCTTGGAAGGGACAATAAGGAAACTCGACTTGAACAGCGCGT 111200
Query: 3 CCC 1
|||
Sbjct: 111201 CCC 111203
Score = 188.817 bits (95.0), Expect = 1.16474e-48
Identities = 148/168 (88%)
Strand = Plus/Minus
Query: 725 GCATAAGAAGAGTCCGATAATGGCCGGTCTTTAAAGGCCCTTAAGAAAGAGGCTTAAGTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110524 GCATAAGAAGAGTCCGATAATGGCCGGTCTTTAAAGGCCCTTAAGAAAGAGGCTTAAGTC 110583
Query: 665 ATCGATTCCAATCCGATAACGCTTTTCTTTTTATTGGTATGCCGCTCCGCGTCCGCGAGC 606
|||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 110584 ATCGATGGAAATCCGATAACGCTTTTCTTTT--------TGC---------TCCGCGAGC 110626
Query: 605 AAGGAGCGAGCTAAGTAAATCTTACCTGAAAATGAGTGAGATTCGATT 558
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110627 AAGGAGCGAGCTAAGTAAATCTTACCTGAAAATGAGTGAGATTCGATT 110691
Score = 75.8223 bits (38.0), Expect = 1.20467e-14
Identities = 47/50 (94%)
Strand = Plus/Minus
Query: 797 CAAAGTCCTACAAATGAAGACTCGGGCCTGTCAAGCCTGCTTTCCTCGAT 748
|||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 137424 CAAAGTCCTACAAATGAAGACTTGGCCCTATCAAGCCTGCTTTCCTCGAT 137473
Score = 71.8576 bits (36.0), Expect = 1.88089e-13
Identities = 60/68 (88%)
Strand = Plus/Minus
Query: 887 CTATGCCAATGGACTCATGACATCCATGCACTGAGTCGTCAAATGACGCACGTTAAGAAG 828
|||||||||| || || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 137279 CTATGCCAATAGATTCGTGACATCCATGTACTGAGTCGTCAAATGAGCCACGTTAAGAAA 137338
Query: 827 ACCCAAGC 820
|||||||
Sbjct: 137339 GCCCAAGC 137346
Score = 65.9106 bits (33.0), Expect = 1.1604e-11
Identities = 36/37 (97%)
Strand = Plus/Minus
Query: 683 AAGAAAGAGGCTTAAGTCATCGATTCCAATCCGATAA 647
|||||||||||||||||||||| ||||||||||||||
Sbjct: 179329 AAGAAAGAGGCTTAAGTCATCGCTTCCAATCCGATAA 179365
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597