BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig147
(1199 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 737.9 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 737.929 bits (372.0), Expect = 0.0
Identities = 408/420 (97%)
Strand = Plus/Minus
Query: 428 AAATGGGACCGCGAAGACAGCCCACCACTGAAACTTGCTTTGCTCTCGCTCGGCTCGCTC 369
||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||
Sbjct: 145568 AAATGGGACCGCGAAGACAACCCACCACTAGAGCTTGCTTTGCTCTCGCTCCGCTCGCTC 145627
Query: 368 CCACCTGTCTTCTTCCCACTATAGTGAAAGATCTTTCACTTCACCATAGCAGGAACCTCA 309
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145628 CCACCTGTCTTCTTCCCACTATAGTGAAAGATCTTTCACTTCACCATAGCAGGAACCTCG 145687
Query: 308 CTAGCCTTCTCGGCCAGTTAGTCTAACCACAGGGATCCCTTCCTGCTTATCCACCCACCG 249
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 145688 CTAACCTTCTCGGCCAGTTAGTCTAACCACAGGGATCCCCTCCTGCTTACCCACCCACCG 145747
Query: 248 TAAACGATTACTAACGAACTTGGAATACGAATGAGATCAAAAAGGCCATCATTGGGGCAA 189
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145748 TAAACTCTTACTAACGGACTTGGAATACGAATGAGATCAAAAAGGCCATCATTGGGGCAA 145807
Query: 188 ACGATGCAATAGCTTCGGTTAGAGCAAAGCCCAAAATGGCATAACCAAATAATTGTTTTG 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145808 ACGATGCAATAGCTTCGGTTAGAGCAAAGCCCAAAATGGCATAACCAAATAATTGTTTTG 145867
Query: 128 CCAATGATGGATTTCGCGCCACGGAATGAATCGAGGAACTAAGGACGTTTCCAATACCGA 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145868 CCAATGATGGATTTCGCGCCACGGAATGAATCGAGGAACTAAGGACGTTTCCAATACCGA 145927
Query: 68 TAGCAGCTCCCGCTGAAGCAATTGTAGCAGCTCCTGCACCCATTGATTTTGCACCTTCTA 9
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145928 TAGCAGCTCCCGCTGAAGCAATTGTAGCAGCTCCTGCACCCATTGATTTTGCACCTTCTA 145987
Score = 377.14 bits (190.0), Expect = 1.50283e-105
Identities = 208/214 (97%)
Strand = Plus/Plus
Query: 986 ACCGGTCGTTAAGATAGAGTTGGTGTCGGTAGCTGTTCTTGCTTAGCGGGATCAGGTCAC 1045
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 13030 ACCGGTCGTTAAGATAGAGTCGGTGTCGGTAGCAGTTCTTGCTTAGCGGGATCAGGTCAC 13089
Query: 1046 CAATCGGTGACATAGTTTAGGAATGAATATCTGTAACTCCCATTCCAGTACTTAAACTGA 1105
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13090 CAATCGGTGACATAGTTTAGGAATGAATATCCGTAACTCCCATTCCAGTACTTAAACTGA 13149
Query: 1106 CAAAATGGAATAAACAATCAAGACCTGGCTCAAGGCTAACCCCTCCACACTCAGGGTCAG 1165
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 13150 CAAAATGGAATAAAAAATAAAGACCTGGCTCAAGGCTAACCCCTCCACACTCAGGGTCAG 13209
Query: 1166 GAACGGGAAAGGGAGAATGAGTAGGACAGGCTCG 1199
|||||||||| |||||||||||||||||||||||
Sbjct: 13210 GAACGGGAAAAGGAGAATGAGTAGGACAGGCTCG 13243
Score = 186.834 bits (94.0), Expect = 2.91554e-48
Identities = 112/118 (95%)
Strand = Plus/Minus
Query: 427 AATGGGACCGCGAAGACAGCCCACCACTGAAACTTGCTTTGCTCTCGCTCGGCTCGCTCC 368
||||||||| ||||||| |||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 389540 AATGGGACCAGGAAGACAACCCACCACTGGAACTTGCTTTGCTCTCGCTCCGCTCGTTCC 389599
Query: 367 CACCTGTCTTCTTCCCACTATAGTGAAAGATCTTTCACTTCACCATAGCAGGAACCTC 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389600 CACCTGTCTTCTTCCCACTATAGTGAAAGATCTTTCACTTCACCATAGCAGGAACCTC 389657
Score = 159.081 bits (80.0), Expect = 6.59465e-40
Identities = 162/189 (86%)
Strand = Plus/Plus
Query: 19 AAAATCAATGGGTGCAGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTATCGGTATTGG 78
||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 88129 AAAATTAATCGGCGCAGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTGCCGGTATTGG 88188
Query: 79 AAACGTCCTTAGTTCCTCGATTCATTCCGTGGCGCGAAATCCATCATTGGCAAAACAATT 138
||| || | ||||||| | |||| || ||| |||||| |||||||||||||||||
Sbjct: 88189 AAATGTTTTCAGTTCCT----TAATTCTGTTGCGAGAAATCATTCATTGGCAAAACAATT 88244
Query: 139 ATTTGGTTATGCCATTTTGGGCTTTGCTCTAACCGAAGCTATTGCATCGTTTGCCCCAAT 198
|||||||||||| |||||||| |||||| |||||||||||||||| | |||| || |||
Sbjct: 88245 ATTTGGTTATGCTATTTTGGGATTTGCTTTAACCGAAGCTATTGCCTTGTTTTCCTTAAT 88304
Query: 199 GATGGCCTT 207
|||||||||
Sbjct: 88305 GATGGCCTT 88317
Score = 71.8576 bits (36.0), Expect = 1.19153e-13
Identities = 36/36 (100%)
Strand = Plus/Minus
Query: 44 TAGCAGCTCCTGCACCCATTGATTTTGCACCTTCTA 9
||||||||||||||||||||||||||||||||||||
Sbjct: 93273 TAGCAGCTCCTGCACCCATTGATTTTGCACCTTCTA 93308
Score = 48.0694 bits (24.0), Expect = 1.72616e-06
Identities = 24/24 (100%)
Strand = Plus/Plus
Query: 203 GCCTTTTTGATCTCATTCGTATTC 226
||||||||||||||||||||||||
Sbjct: 135053 GCCTTTTTGATCTCATTCGTATTC 135076
Score = 44.1047 bits (22.0), Expect = 2.69512e-05
Identities = 31/34 (91%)
Strand = Plus/Minus
Query: 228 TGGAATACGAATGAGATCAAAAAGGCCATCATTG 195
|||||||||||||||||| | || ||||||||||
Sbjct: 320654 TGGAATACGAATGAGATCCACAATGCCATCATTG 320687
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597