BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig142
(952 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 870.7 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 870.746 bits (439.0), Expect = 0.0
Identities = 551/593 (93%)
Strand = Plus/Plus
Query: 362 AGCTTCTTCCAAAGCATAGGGCTTTCTGGATGTAGATGATGATATCTATAGAGATGGATC 421
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 17487 AGCTTCTTCCAAAGCATACGGCTTTCTGGATGTAGATGATGATATCTATACAGATGGATC 17546
Query: 422 TTATATATATCGTAGAATGAAGTAGCACATGGGTGGNNNNNNNNNNNN--CCAAATCTGC 479
|||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 17547 TTATATATATCGTAGAATGAAGTACCACATGGGTGGATATATATATGAATCCAAATCTGC 17606
Query: 480 CGAATCACTCATGTTATGATCTTCTACATCCTGGGTCTTCCCGTTCCGTCATCTGACTTA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 17607 CGAATCACTCATGTTATGATCTTCTACATCCTGGGTCTTCCCGTTCCGTCATCTGGCTTA 17666
Query: 540 TGTTCTTCATCTAGCATTCAGACCGAATGACTCTATGAAATTAGGTCGATACTTCCACAT 599
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17667 TGTTCTTCATGTAGCATTCAGACCGAATGACTCTATGAAATTACGTCGATACTTCCACAT 17726
Query: 600 ATTATGGGTAAGGTAGGAGACATCTCTATTTTTCCCCGGGGGAATCTTTTGAATTCCCAC 659
||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 17727 ATTATGGGTAACGTAGGAGACATCTCTATTTTTCCCCCGGGGAATCTTTAGAATTCCCAC 17786
Query: 660 TGCTTAGCTTTCAATTCGCCTCTGACCATCAAATGAAATGTGAATAACCCGTCCTACTCT 719
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 17787 TGCTTAACTTTCAATTCGCCTCTGACCATCAAATGAAATGTGAATAACCCGTCCTCCTCT 17846
Query: 720 CTTTGAAAGAAGGGGCGCTTCCGGTTCTGTCGGTGCTTGAAAGAATTTTATCTTCTCCAT 779
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 17847 CTTTGAAAGAAGGGGCGCTTCCGGTTCTGTCGGTGCTTGAAACAATTTTGTCTTCTCCAT 17906
Query: 780 ATTACTATATCTCGTCAGTCAATAATTTTTTATGAGGAACTACTGAACTCAATCACTTGC 839
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 17907 ATTACTATATCTCTAGAGTCAATAATTTTATATGAGGAACTACTGAACTCAATCACTTGC 17966
Query: 840 TGCCCTTACTCTTCAGTTTTCTGTTGAGGTCTATCCTGCANAGGTACTCAAATTGGATCA 899
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 17967 TGCCGTTACTCTTCAGTTTTCTGTTGAGGTCTATCCTGCAGAGGTACTCAAATTGGATCA 18026
Query: 900 GTGATCGATTTCTNNNNTTCGTCGTAAACAAAATTTTTTATTTCAAATTACGT 952
||||||||||||| |||||||||||| |||| ||||||| ||||||||
Sbjct: 18027 GTGATCGATTTCTAGGTTTCGTCGTAAACCTAATTGGTTATTTCCAATTACGT 18079
Score = 301.811 bits (152.0), Expect = 5.65179e-83
Identities = 222/246 (90%)
Strand = Plus/Minus
Query: 247 ATAGTACCGGAGTCGTTCAAAGAGCCCTTCTTTCTATTCTGTTTTGTGCGTGTCAACTAT 188
|||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 169852 ATAGCACCGGAGTCGTGAAAAGAGCCCTTCTTTCTATT-----TTGTGCGTGTCAACTAT 169906
Query: 187 TGATTCTATGCCATCAAAGCATGCTAACAGCAGAAAAGAAATGCAAGTACATACAACTGC 128
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 169907 TGATTCTATGCCATCAAAGCATGCTAACAGCAGAA-----ATGCAAGTACATACAACTGC 169961
Query: 127 GGTAATGCCGCATCATTGATAAAGAACCTTGCCATCCCCAGCTTTGTCCCCTGCAACAAG 68
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 169962 GGTAATGCCGCATCGTTGATAAAGAACCTTGCCATCCCCAGCTTTGTCCCCTGCTTAAAG 170021
Query: 67 TTCATTGGCATATTCCCCTTCCCCTTCTATTCCCAAAAGCTGATTCAATAGGCTTCCTTT 8
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 170022 TTCATTGGCATATTCCCCTTCCCCTTCTATTCCCA-------ATTCAATAGGCTTCCTTT 170074
Query: 7 ATTGAT 2
||||||
Sbjct: 170075 ATTGAT 170097
Score = 48.0694 bits (24.0), Expect = 1.36752e-06
Identities = 30/32 (94%)
Strand = Plus/Minus
Query: 365 AGCTCGAAAAACTGTTTGGGAATTGATCAAAA 334
||||||||||| |||||||||||||||||||
Sbjct: 17436 AGCTCGAAAAAGAGTTTGGGAATTGATCAAAA 17467
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597