BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig139
(859 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1039.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1039.25 bits (524.0), Expect = 0.0
Identities = 612/641 (95%)
Strand = Plus/Plus
Query: 1 TTTGGCAGCTGTTAGGCAAGTGATACCGTACGCCGCAAGTCCGCACCTATATAGTGAGGG 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 107716 TTTGGCAGCTGTTAGGCAAGTGATACCGTACGC---AAGTCCGCACCTATATAGTGAGGG 107772
Query: 61 TGCGTTAAGGCGAGTTGATGAGCTAATACGGCTGGCTTACTTTTCATATGTATGTGGATG 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107773 TGCGTTAAGGCGAGTTGATGAGCTAATACGGCTGGCTTACTTTTCATATGTATGT----- 107827
Query: 121 TGGAGGGAACCTGGCGTTAAGCACTGGGGCCAGCCACAAAGGAATAGGTTTGAATGTTGA 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107828 -GGAGGGAACCTGACGTTAAGCACTGGGGCCAGCCACAAAGGAATAGGTTTGAATGTTGA 107886
Query: 181 TATATACCGTCTTTCAGCTGACCTTTCCAAACCATGCTTCGCAATCAAGCTAGAAAAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107887 TATATACCGTCTTTCAGCTGACCTTTCCAAACCATGCTTCGCAATCAAGCTAGAAAAAGA 107946
Query: 241 CTAAGCAAGTGCTGTCCTAATGAAATGGCGGATAGTTTAGTATAACATTCATTCCTGACC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107947 CTAAGCAAGTGCTGTCCTAATGAAATGGCGGATAGTTTAGTATAACATTCATTCCTGACC 108006
Query: 301 GCCGCTGCCTGCTTAAGACTAAAAGCTAGTAGTGAGACTTCTATTCTTCCGCCCTATCTA 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 108007 GCCGCTGCCTGCTTAAGACTAAAAGCTAGTAGTGAGACTTCTATTCTGCCGCCCTATCTA 108066
Query: 361 GTAAGAGCCTCTAAAGCTATGTTTGGCGTAATCAATATAATAGTTGGGCTCGGCTTTACT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108067 GTAAGAGCCTCTAAAGCTATGTTTGGCGTAATCAATATAATAGTTGGGCTCGGCTTTACT 108126
Query: 421 GAAGAAGAAGGGGCGAAGTCTCAACTACCAGACTACTACTATACCAAACGCACTCCACGA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108127 GAAGAAGAAGGGGCGAAGTCTCAACTACCAGACTACTACTATACCAAACGCACTCCACGA 108186
Query: 481 GTGGATTAGTTGAGTGACTAGACTGATACTCTAAACGAGACCAATACTATCAAAAAGAAA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108187 GTGGATTAGTTGAGTGACTAGACTGATACTCTAAACGAGACCAATACTATCAAAAAGAAA 108246
Query: 541 GTAGCAAAAATCATAAGAGAAGAAAAG--CA--------AGTCAAGCAGTATGCCTGGTT 590
||||||||||||||||||||||||||| || | || |||| ||| ||||
Sbjct: 108247 GTAGCAAAAATCATAAGAGAAGAAAAGTTCACAGAAGGTTGGGAAATAGTACGCCCGGTT 108306
Query: 591 CACCAGGTTCTACCACTGCAGGGCCCAATCATAGTCAAAAG 631
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 108307 CACCAGGTTCTACCACTGCAGGGCCCAATCATACTCAAAAG 108356
Score = 99.6106 bits (50.0), Expect = 3.75958e-22
Identities = 68/74 (92%)
Strand = Plus/Plus
Query: 550 ATCATAAGAGAAGAAAAGCAAGTCAAGCAGTATGCCTGGTTCACCAGGTTCTACCACTGC 609
||||||||||||||||||||||| || |||| ||||||||||| |||||||||||| ||
Sbjct: 85253 ATCATAAGAGAAGAAAAGCAAGTTCAGTAGTACGCCTGGTTCACGAGGTTCTACCACCGC 85312
Query: 610 AGGGCCCAATCATA 623
||||||||||||||
Sbjct: 85313 AGGGCCCAATCATA 85326
Score = 99.6106 bits (50.0), Expect = 3.75958e-22
Identities = 68/74 (92%)
Strand = Plus/Plus
Query: 550 ATCATAAGAGAAGAAAAGCAAGTCAAGCAGTATGCCTGGTTCACCAGGTTCTACCACTGC 609
||||||||||||||||||||||| || |||| ||||||||||| |||||||||||| ||
Sbjct: 286753 ATCATAAGAGAAGAAAAGCAAGTTCAGTAGTACGCCTGGTTCACGAGGTTCTACCACCGC 286812
Query: 610 AGGGCCCAATCATA 623
||||||||||||||
Sbjct: 286813 AGGGCCCAATCATA 286826
Score = 85.7341 bits (43.0), Expect = 5.65425e-18
Identities = 49/51 (96%)
Strand = Plus/Minus
Query: 600 GAACCTGGTGAACCAGGCATACTGCTTGACTTGCTTTTCTTCTCTTATGAT 550
|||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 389651 GAACCTCGTGAACCAGGCGTACTGCTTGACTTGCTTTTCTTCTCTTATGAT 389701
Score = 63.9282 bits (32.0), Expect = 2.07302e-11
Identities = 38/40 (95%)
Strand = Plus/Plus
Query: 578 AGTATGCCTGGTTCACCAGGTTCTACCACTGCAGGGCCCA 617
|||||||| ||||||| |||||||||||||||||||||||
Sbjct: 10189 AGTATGCCCGGTTCACGAGGTTCTACCACTGCAGGGCCCA 10228
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597