BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig135
         (1018 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
         1 sequences; 430597 total letters
Searching................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 159.1    5.5921e-40

>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome 

 Length = 430597


Score = 159.081 bits (80.0), Expect = 5.5921e-40
Identities = 109/121 (90%)
Strand = Plus/Minus

Query: 867    ACTCAATTCCCGTCTTCTCTAGTGGGAATTCTGATCCCGAATAACTAAATAGCGTCAGTG 808
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399130 ACTCAATTCCCGTCTTCTCTAGTGGGAATTCTGATCCCGAATAACTAAATAGCGTCAGTG 399189

Query: 807    AGGATG------------CCCAGTAGCTTCTCTTTCAGCTTCTTAACCGCGTGGGGCCTT 760
              ||||||            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399190 AGGATGCCCATGCCCAGTCCCAGTAGCTTCTCTTTCAGCTTCTTAACCGCGTGGGGCCTT 399249

Query: 759    T 759
              |
Sbjct: 399250 T 399250



Score = 113.487 bits (57.0), Expect = 2.97016e-26
Identities = 120/141 (85%)
Strand = Plus/Minus

Query: 734    TAACCGTCCAGTCTTGGAAGTGAGGGTCTTGCAATCATTCCAATCCCTCTACTCTAGTAT 675
              |||||||  |||||||||||| ||||| ||||||||||||||||||||||| ||| |   
Sbjct: 399504 TAACCGTAAAGTCTTGGAAGTTAGGGTTTTGCAATCATTCCAATCCCTCTAGTCTTG--- 399560

Query: 674    TAGCAGTTTCCTGAAGCCATTCTGCTATCATTCTAGTTTTTAGTAAAGTGACTGCCGTTG 615
                |||||||| | ||||||||||||||||||||||||| ||||| |||||||||||    
Sbjct: 399561 --GCAGTTTCATTAAGCCATTCTGCTATCATTCTAGTTGTTAGTGAAGTGACTGCC---- 399614

Query: 614    TTGATGTTCGATCGTTTAACT 594
               |||||||||||||| |||||
Sbjct: 399614 -TGATGTTCGATCGTGTAACT 399644


  Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
  Number of letters in database: 430597
  Number of sequences in database:  1

Lambda     K      H
    1.37    0.711     1.31

Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597