BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig131
(868 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 775.6 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 775.593 bits (391.0), Expect = 0.0
Identities = 468/496 (94%)
Strand = Plus/Plus
Query: 1 CTATCAACGAATAATAAACATTTCATAAGAAAAGAATAATTTGGAGTTTCAATCTCAAAG 60
||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 77112 CTATCAACGAATAATAAACATTTTATAAGAAAAGATAAATTTTTTGTTGAAATCTCAAAG 77171
Query: 61 AAAGGTATAGGTTCAATTTTTCACAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 120
|||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 77172 AAAGGTATAGGTGAAATTTGGAATAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 77231
Query: 121 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77232 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 77291
Query: 181 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77292 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 77351
Query: 241 TAGAAATTCTCATAGGTGAAGCAAATCAAACCTATTTTCAGACAAAGAAGATNNNNNNNG 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 77352 TAGAAATTCTCATAGGTGAAGCAAATCAAACCAATTTTCAGACAAAGAAGATAAAAAAAG 77411
Query: 301 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77412 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 77471
Query: 361 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAGGGGGCGAAGGATATTCATGATATTC 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 77472 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAAGGGGCGAAGGATATTCATGATATTC 77531
Query: 421 GGAAAGATTTATGTTAATTCGCTCTGCGAGCAGAGCGGTATACCGAAAAAGAGAAGCGAC 480
|||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 77532 AGAAAGATTTATGTTCATTCGCTCTGCTCGCAGAGCGGTATACCGAAAAAAAGAAGCGAC 77591
Query: 481 TACCTTACTTAAGCAA 496
||||||||||||||||
Sbjct: 77592 TACCTTACTTAAGCAA 77607
Score = 775.593 bits (391.0), Expect = 0.0
Identities = 468/496 (94%)
Strand = Plus/Plus
Query: 1 CTATCAACGAATAATAAACATTTCATAAGAAAAGAATAATTTGGAGTTTCAATCTCAAAG 60
||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 278612 CTATCAACGAATAATAAACATTTTATAAGAAAAGATAAATTTTTTGTTGAAATCTCAAAG 278671
Query: 61 AAAGGTATAGGTTCAATTTTTCACAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 120
|||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 278672 AAAGGTATAGGTGAAATTTGGAATAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 278731
Query: 121 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278732 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 278791
Query: 181 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278792 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 278851
Query: 241 TAGAAATTCTCATAGGTGAAGCAAATCAAACCTATTTTCAGACAAAGAAGATNNNNNNNG 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 278852 TAGAAATTCTCATAGGTGAAGCAAATCAAACCAATTTTCAGACAAAGAAGATAAAAAAAG 278911
Query: 301 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278912 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 278971
Query: 361 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAGGGGGCGAAGGATATTCATGATATTC 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 278972 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAAGGGGCGAAGGATATTCATGATATTC 279031
Query: 421 GGAAAGATTTATGTTAATTCGCTCTGCGAGCAGAGCGGTATACCGAAAAAGAGAAGCGAC 480
|||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 279032 AGAAAGATTTATGTTCATTCGCTCTGCTCGCAGAGCGGTATACCGAAAAAAAGAAGCGAC 279091
Query: 481 TACCTTACTTAAGCAA 496
||||||||||||||||
Sbjct: 279092 TACCTTACTTAAGCAA 279107
Score = 775.593 bits (391.0), Expect = 0.0
Identities = 468/496 (94%)
Strand = Plus/Plus
Query: 1 CTATCAACGAATAATAAACATTTCATAAGAAAAGAATAATTTGGAGTTTCAATCTCAAAG 60
||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 427862 CTATCAACGAATAATAAACATTTTATAAGAAAAGATAAATTTTTTGTTGAAATCTCAAAG 427921
Query: 61 AAAGGTATAGGTTCAATTTTTCACAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 120
|||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 427922 AAAGGTATAGGTGAAATTTGGAATAGTCATTTCAATCTTTTTCTTCCAATTCTAAGAAAG 427981
Query: 121 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427982 AAAAATCCCGAAAAATCCGTCAATAAATGACGAACTCCATTATACAGATGATAGGACAGG 428041
Query: 181 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428042 GCTAAGGCAGTAATCTCGACGGAGATTAGGATGAGCTTTGATGAATAAAAGAAGAATTGG 428101
Query: 241 TAGAAATTCTCATAGGTGAAGCAAATCAAACCTATTTTCAGACAAAGAAGATNNNNNNNG 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 428102 TAGAAATTCTCATAGGTGAAGCAAATCAAACCAATTTTCAGACAAAGAAGATAAAAAAAG 428161
Query: 301 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428162 AAAACTATAGTGGCTAGGAAAGCTCCGGAGATTCTATGGGAAATTGAAAACGTCGAAGTA 428221
Query: 361 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAGGGGGCGAAGGATATTCATGATATTC 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 428222 AGCTGTGGCTTATAAATAGGAAGATGAGGAGATAAGGGGCGAAGGATATTCATGATATTC 428281
Query: 421 GGAAAGATTTATGTTAATTCGCTCTGCGAGCAGAGCGGTATACCGAAAAAGAGAAGCGAC 480
|||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 428282 AGAAAGATTTATGTTCATTCGCTCTGCTCGCAGAGCGGTATACCGAAAAAAAGAAGCGAC 428341
Query: 481 TACCTTACTTAAGCAA 496
||||||||||||||||
Sbjct: 428342 TACCTTACTTAAGCAA 428357
Score = 200.711 bits (101.0), Expect = 1.39827e-52
Identities = 104/105 (99%)
Strand = Plus/Plus
Query: 558 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCGTTATCCC 617
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 77669 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCCTTATCCC 77728
Query: 618 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 662
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77729 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 77773
Score = 200.711 bits (101.0), Expect = 1.39827e-52
Identities = 104/105 (99%)
Strand = Plus/Plus
Query: 558 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCGTTATCCC 617
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 279169 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCCTTATCCC 279228
Query: 618 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 662
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279229 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 279273
Score = 200.711 bits (101.0), Expect = 1.39827e-52
Identities = 104/105 (99%)
Strand = Plus/Plus
Query: 558 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCGTTATCCC 617
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 428419 GAATGTTATAACTCCTAATTCTTTGGTAGCGGACCTCTTTGATAGTTCGACCCTTATCCC 428478
Query: 618 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 662
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428479 CCGTCTAACTCAACTATTCGACTGTACGGCTATTGTGATTGCGAG 428523
Score = 157.099 bits (79.0), Expect = 1.87952e-39
Identities = 82/83 (99%)
Strand = Plus/Minus
Query: 640 AGTCGAATAGTTGAGTTAGACGGGGGATAACGGTCGAACTATCAAAGAGGTCCGCTACCA 581
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260128 AGTCGAATAGTTGAGTTAGACGGGGGATAAGGGTCGAACTATCAAAGAGGTCCGCTACCA 260187
Query: 580 AAGAATTAGGAGTTATAACATTC 558
|||||||||||||||||||||||
Sbjct: 260188 AAGAATTAGGAGTTATAACATTC 260210
Score = 105.558 bits (53.0), Expect = 6.1588e-24
Identities = 53/53 (100%)
Strand = Plus/Minus
Query: 385 ATCTTCCTATTTATAAGCCACAGCTTACTTCGACGTTTTCAATTTCCCATAGA 333
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364915 ATCTTCCTATTTATAAGCCACAGCTTACTTCGACGTTTTCAATTTCCCATAGA 364967
Score = 103.575 bits (52.0), Expect = 2.43357e-23
Identities = 64/68 (94%)
Strand = Plus/Plus
Query: 429 TTATGTTAATTCGCTCTGCGAGCAGAGCGGTATACCGAAAAAGAGAAGCGACTACCTTAC 488
||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 146729 TTATGTTCATTCGCTCTGCGAGCGGAGCAGTATACCGAAAAAAAGAAGCGACTACCTTAC 146788
Query: 489 TTAAGCAA 496
||||||||
Sbjct: 146789 TTAAGCAA 146796
Score = 71.8576 bits (36.0), Expect = 8.59434e-14
Identities = 42/44 (95%)
Strand = Plus/Plus
Query: 453 GAGCGGTATACCGAAAAAGAGAAGCGACTACCTTACTTAAGCAA 496
|||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 19909 GAGCGGCATACCGAAAAAAAGAAGCGACTACCTTACTTAAGCAA 19952
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597