BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig130
(1974 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1937.2 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1937.25 bits (977.0), Expect = 0.0
Identities = 1018/1034 (98%)
Strand = Plus/Minus
Query: 1034 TAAACTTCGACCCTTATTTCTTTCTTCATATTGTAAAGGGGAGCAAAGCCCGTTTTTTGC 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 TAAACTTCGACCCTTATTTCTTTCTTCATATTGTAAAGGGGAGCAAAGCCCGTTTTTTGC 6107
Query: 974 TCCCTCTATTGATAGAAAAAGGGCACTCCTGCCGTCGTTTCAGTGACTCATAGGGCTTCC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 TCCCTCTATTGATAGAAAAAGGGCACTCCTGCCGTCGTTTCAGTGACTCATAGGGCTTCC 6167
Query: 914 CTCAGCGCAGTCTTTTTCGTTCTTGAGAATGGTCGCCACTTCTACCAGGACCGGAATGAT 855
|||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6168 CTCAGCTCAGTCTTTTTGGTTCTTGAGAATGGTCGCCACTTCTCCCAGGACCGGAATGAT 6227
Query: 854 TATCCCTGCCCGATGGGTCTACATCCATCCCTGAATGTCGTCGGGTACTGTTAACTTCCC 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6228 TATCCCTGCCCGATGGGTCTACATCCATCCCTGAATGTCGTCGGGTACTGTTAACTTCCC 6287
Query: 794 CGCCATTCTTGTAACTGTCACCTGTAATCCGCGCAGGTGTGTCCGCACCCCCCTGAGTGG 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 CGCCATTCTTGTAACTGTCACCTGTAATCCGCGCAGGTGTGTCCGCACCCCCCTGAGTGG 6347
Query: 734 ACGAGAAAGAAAGGATTTCTCGGAGCAACCCCCCAGGTTCCAGACCCAGGAGTCAACTTT 675
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6348 ACGAGAAAGAAAGGATTTCTCGGAGCAACCCCCCAGGTTCCAGACCCAGGAGTAAACTTT 6407
Query: 674 CCCGTATGAGCATTCGGTACATGTATCAGTCCGTGGAAGAGTGAAAGGGTCACCACTACT 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 CCCGTATGAGCATTCGGTACATGTATCAGTCCGTGGAAGAGTGAAAGGGTCACCACTACT 6467
Query: 614 GAGGATNNNNNNNTAATCTTAGATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCTGTG 555
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 GAGGATCCCCCCCTAATCTTAGATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCTGTG 6527
Query: 554 CTTACACACAAGGCTACCCTTTTCCGAAAGCTCCGCAGGACCACCTACCACTAGTCTTCG 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 CTTACACACAAGGCTACCCTTTTCCGAAAGCTCCGCAGGACCACCTACCACTAGTCTTCG 6587
Query: 494 GCCGGAGGGGTTTATTGCACAAAAAGGCCGGGGCGCAGGCTCCCGAAGAGAGAAGCCCAA 435
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6588 GCCGGAGGGGTTTATTGCACAAAAACGCCGGGGCGCAGGCTCCCGAAGAGAGAAGCCCAA 6647
Query: 434 CGAATGTCAGATGCAAAGCCCCGCACCTCATTAAGATCATATTGGCATACTCTCCCAAAA 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6648 CGAATGTCAGATGCAAAGCCCCGCACCTCATTAAGATCATATTGGCATACTCTCCCAAAA 6707
Query: 374 AAGAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCAC 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 AAGAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCAC 6767
Query: 314 CGCCCTTCTCACGGAGCCGTACGTGGACGTTACCGCTCATACAGCTCCCAGCCAGCAAGC 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 CGCCCTTCTCACGGAGCCGTACGTGGACGTTACCGCTCATACAGCTCCCAGCCAGCAAGC 6827
Query: 254 AGTTAGCCTTCCTCTACAAGGAATGGAAGTGTGGATGAATCGACATCAAATATAGGATTG 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6828 AGTTAGCCTTCCTCTACAAGGAATGGAAGTGTGGATGAATCGACATCAAATATAGGATTG 6887
Query: 194 TTGTTGTACACGATCTCCATTTTAGTAGTCCTAGCTATCCACTCCACTATGTGGTAGAGT 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6888 TTGTTGTACACGATCTCCATTTTAGTAGTCCTAGCTATCCACTCCACTATGTGGTAGAGT 6947
Query: 134 GTTCGTCCCAACCCCTTCGCAGGGGTACCTTCCCTTTTAATTGAGAGAAGGACTCGGAAT 75
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6948 GTTCGTCCCCACCCCTTCGCAGGGGTACCTTCCCTTTTAATTGAGAGAAGGACTCGGAAT 7007
Query: 74 TGACTCCCCTCGATTCGAGATCCGAAAGAAGGGTATAGAGTTTATCCAAGGAATGCTCTC 15
| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 7008 TTACTCCCCTCGATTCGAGATCCGAAAGAAGGGTATGGAGTTTCTCCAAGGAATGCTCTC 7067
Query: 14 CCGTGGCGGTACGC 1
||||||||||||||
Sbjct: 7068 CCGTGGCGGTACGC 7081
Score = 1505.1 bits (759.0), Expect = 0.0
Identities = 774/779 (99%)
Strand = Plus/Plus
Query: 1194 CCGGTATGCCGCTCCGCCAGCAAGGAGCGAAAGAACCAAGTTTTCTGTGGTGATGTCAGA 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86343 CCGGTATGCCGCTCCGCCAGCAAGGAGCGAAAGAACCAAGTTTTCTGTGGTGATGTCAGA 86402
Query: 1254 ATTTGCACCTATTTGTATCTATTTAGTGATCAGCCCGCTAGTTTCTTTGATCCCACTCGG 1313
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 86403 ATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGCTCCCACTCGG 86462
Query: 1314 TCTTCCTTTTCTATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGA 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86463 TCTTCCTTTTCTATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGA 86522
Query: 1374 ATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATAAGATTTTATCTTGT 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86523 ATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATAAGATTTTATCTTGT 86582
Query: 1434 TTCCATTTTATTTATTATTCCTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACC 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86583 TTCCATTTTATTTATTATTCCTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACC 86642
Query: 1494 TCCCAACAAGATTGATCCATTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGAC 1553
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 86643 TCCCAACAAGATTGATCCGTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGAC 86702
Query: 1554 GATTGGATCTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAACCACTAGTGAT 1613
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86703 GATTGGATCTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAACCACTAGTGAG 86762
Query: 1614 AGGGCAAAAATAGGGGGGAAGGACAAAGGAAAGAGCGATGCCTACATTAAATCAATTGAT 1673
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86763 AGGGCAAAAATTGGGGGGAAGGACAAAGGAAAGAGCGATGCCTACATTAAATCAATTGAT 86822
Query: 1674 TCGTCATGGTAGAGAAGAAAAACGGCGCACGGACCGTACTCGAGCTTTGGATCAATGTCC 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86823 TCGTCATGGTAGAGAAGAAAAACGGCGCACGGACCGTACTCGAGCTTTGGATCAATGTCC 86882
Query: 1734 CCAGAAGCAAGGAGTATGCCCGCGTGTTTCAACGAGAACACCGAAAAAACCTAATTCAGC 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86883 CCAGAAGCAAGGAGTATGCCCGCGTGTTTCAACGAGAACACCGAAAAAACCTAATTCAGC 86942
Query: 1794 TCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTCC 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86943 TCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTCC 87002
Query: 1854 AGGCGAAGGTCATAATTTGCAGGAACATTCTATGGTCTTAATAAGAGGAGGTAGAGTGAA 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87003 AGGCGAAGGTCATAATTTGCAGGAACATTCTATGGTCTTAATAAGAGGAGGTAGAGTGAA 87062
Query: 1914 AGATTCGCCAGGTGTGAAATTCCATTGTATTCGAGGAGTCAAGGATTTGCTGGGAATTC 1972
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87063 AGATTCGCCAGGTGTGAAATTCCATTGTATTCGAGGAGTCAAGGATTTGCTGGGAATTC 87121
Score = 829.117 bits (418.0), Expect = 0.0
Identities = 433/438 (99%)
Strand = Plus/Plus
Query: 1194 CCGGTATGCCGCTCCGCCAGCAAGGAGCGAAAGAACCAAGTTTTCTGTGGTGATGTCAGA 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287843 CCGGTATGCCGCTCCGCCAGCAAGGAGCGAAAGAACCAAGTTTTCTGTGGTGATGTCAGA 287902
Query: 1254 ATTTGCACCTATTTGTATCTATTTAGTGATCAGCCCGCTAGTTTCTTTGATCCCACTCGG 1313
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 287903 ATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGCTCCCACTCGG 287962
Query: 1314 TCTTCCTTTTCTATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGA 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287963 TCTTCCTTTTCTATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGA 288022
Query: 1374 ATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATAAGATTTTATCTTGT 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288023 ATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATAAGATTTTATCTTGT 288082
Query: 1434 TTCCATTTTATTTATTATTCCTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACC 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288083 TTCCATTTTATTTATTATTCCTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACC 288142
Query: 1494 TCCCAACAAGATTGATCCATTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGAC 1553
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 288143 TCCCAACAAGATTGATCCGTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGAC 288202
Query: 1554 GATTGGATCTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAACCACTAGTGAT 1613
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288203 GATTGGATCTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAACCACTAGTGAG 288262
Query: 1614 AGGGCAAAAATAGGGGGG 1631
||||||||||| ||||||
Sbjct: 288263 AGGGCAAAAATTGGGGGG 288280
Score = 89.6988 bits (45.0), Expect = 8.39568e-19
Identities = 52/53 (98%)
Strand = Plus/Minus
Query: 1146 GGAACGAAGAACGAAACTTTACGACAGCTTTTTCGTAGACGTTCGACTTGCAT 1094
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 378048 GGAACGAAGAACGAAACTTTACGACAGCTTTTTCGTAGACGTTC-ACTTGCAT 378100
Score = 85.7341 bits (43.0), Expect = 1.31085e-17
Identities = 43/43 (100%)
Strand = Plus/Plus
Query: 1066 GAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGT 1108
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108368 GAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGT 108410
Score = 81.7694 bits (41.0), Expect = 2.04667e-16
Identities = 51/53 (96%)
Strand = Plus/Plus
Query: 1094 ATGCAAGTCGAACGTCTACGAAAAAGCTGTCGTAAAGTTTCGTTCTTCGTTCC 1146
|||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 192018 ATGCAAGT-GAACGTTTACGAAAAAGCTGTCGTAAAGTTTCGTTCTTCGTTCC 192070
Score = 59.9635 bits (30.0), Expect = 7.50371e-10
Identities = 36/38 (95%)
Strand = Plus/Plus
Query: 1035 TCTTGGGTTAGGGTGAAATCCGGAGATCTACGAAGGAA 1072
|||||||| ||||||||||||||||||||||||||||
Sbjct: 216659 TCTTGGGTCGGGGTGAAATCCGGAGATCTACGAAGGAA 216696
Score = 55.9988 bits (28.0), Expect = 1.17158e-08
Identities = 28/28 (100%)
Strand = Plus/Plus
Query: 1079 CTATATGCTTAACACATGCAAGTCGAAC 1106
||||||||||||||||||||||||||||
Sbjct: 66139 CTATATGCTTAACACATGCAAGTCGAAC 66166
Score = 55.9988 bits (28.0), Expect = 1.17158e-08
Identities = 28/28 (100%)
Strand = Plus/Plus
Query: 1045 GGGTGAAATCCGGAGATCTACGAAGGAA 1072
||||||||||||||||||||||||||||
Sbjct: 109018 GGGTGAAATCCGGAGATCTACGAAGGAA 109045
Score = 55.9988 bits (28.0), Expect = 1.17158e-08
Identities = 28/28 (100%)
Strand = Plus/Plus
Query: 1079 CTATATGCTTAACACATGCAAGTCGAAC 1106
||||||||||||||||||||||||||||
Sbjct: 416889 CTATATGCTTAACACATGCAAGTCGAAC 416916
Score = 52.0341 bits (26.0), Expect = 1.82923e-07
Identities = 26/26 (100%)
Strand = Plus/Minus
Query: 1105 TTCGACTTGCATGTGTTAAGCATATA 1080
||||||||||||||||||||||||||
Sbjct: 107104 TTCGACTTGCATGTGTTAAGCATATA 107129
Score = 44.1047 bits (22.0), Expect = 4.45924e-05
Identities = 25/26 (96%)
Strand = Plus/Minus
Query: 1220 CTCCTTGCTGGCGGAGCGGCATACCG 1195
||||||||| ||||||||||||||||
Sbjct: 19896 CTCCTTGCTCGCGGAGCGGCATACCG 19921
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597