BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig127
(2528 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1675.6 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1675.58 bits (845.0), Expect = 0.0
Identities = 962/1003 (96%)
Strand = Plus/Minus
Query: 1531 CTTAGGAAGGAATGGAAAGATAGGAAGCTTGGAGAGCTAATGGAAAGAAATGCGTAAGAA 1472
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 365497 CTTAGGAAGGAATGGAAAGATAGGAAGCTTGGAGAGCTAATGGAAAGAAAT-----AGAA 365551
Query: 1471 ATAACAGATCTGCGATAGAAGTCGAATACGATTAAGTAACTAGGGGCAAGATACAGACTT 1412
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 365552 ATAACAGATCTGCGATAGAAGTCGAATACAATTAAGTAACTAGGGGCAAGATACAGACTT 365611
Query: 1411 TAGCGCGTCAAGTCATACACAAACCGGAGTGACTTCACTACCTGAAGAAAGAAAGCAGCT 1352
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 365612 TAGAGCGTCAAGTCATACACAAATCGGAGTGACTTCACTACCTGAAGAAAGAAAGCTGCT 365671
Query: 1351 TCGGCAGGGTCGAAGAAGACGTGTAAGACACCGAGGGGCCGGGGCTTCTTTATTGTAAGG 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365672 TCGGCAGGGTCGAAGAAGACGTGTAAGACACCGAGGGGCCGGGGCTTCTTTATTGTAAGG 365731
Query: 1291 CGTCTAGAAGCCCAATTTTTGGCTTTTTTGTCGTGTCTTATGGGCA------TGTTCACA 1238
||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 365732 CGTCTAGAAGCCCAATTTTTG---------TCATGTCTTATGGGCACACAAATGTTCACA 365782
Query: 1237 AAGGAAAAGGCTCTCCATGGGCAGCGTCTGCTTCGGCGCAAAGCGAATAGGCTGGCAGTC 1178
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 365783 AAGGAAAAGGCTCTCCATGGGCAGCGTCTGCTTCGGCTCAAAGCGAATAGGCTGGCAGTC 365842
Query: 1177 TTGAAGCGAAGGAGAATTCTTTAACTGTTCGGTGTCGGCATCTTTTCCTACCTCTAACTG 1118
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 365843 TTGAAGCGACGGAGAATTCTTTAACTGTTCGGTGTCGGCATCTTTTCCTACTTCTAACTG 365902
Query: 1117 TTCTCCTAACCGGGCAAGGTAATCGGCTAACCGGGAATTCATCTTCAGAGCTAAGTCCCA 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365903 TTCTCCTAACCGGGCAAGGTAATCGGCTAACCGGGAATTCATCTTCAGAGCTAAGTCCCA 365962
Query: 1057 AGGAGGCAGGTTGGAATGTACGGGCGTAGGTTAGCGTCTCGTCCTACGAATGATAGCCTT 998
||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 365963 AGGAGACAGGTTGAAATGTACGGGCGTAGGTTAGCGTCTCGTCCTACAAATGATAGCCTT 366022
Query: 997 TGAAGGCCGCCCACGGGATGCGCTGTACGGTAGTAGTTTATGTTAGCTGCTTATCCGGTG 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366023 TGAAGGCCGCCCACGGGATGCGCTGTACGGTAGTAGTTTATGTTAGCTGCTTATCCGGTG 366082
Query: 937 CCTTCTTTACGACTTTCGACCAA------ATTGAAGAAACTCTTGTTTAGTCAGGACGTC 884
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 366083 CCTTCTTTACGACTTTCGACCAAGCCATTATTGAAGAAACTCTTGTTTAGTCAGGACGTC 366142
Query: 883 GTTCCCGTCCCTTGTGGTGCTTTTTCAACCCCTTGCTTTGACTTGGTAAATTGCATCTGG 824
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 366143 GTTCCCGTCCCTTGTGGTGCTTTTTCAACCCCTTGCTTTGACTTGGTAAATTTCATCTGG 366202
Query: 823 ATTCGCTCCAATTCCAACAGATACCGCATTATCTGCATCACCAGTTCTAGGCGTATACTA 764
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366203 ATTCGCTCCAATTCCAAGAGATACCGCATTATCTGCATCACCAGTTCTAGGCGTATACTA 366262
Query: 763 TGTTCCAGAGCCTTTAGTTTAGTTGCGGAGTTAGAAGCTACTATATATAGATAGTGCCCG 704
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 366263 TGTTCCAGAGCCTTTAGTTTAGTTGCAGAGCTAGAAGCTACTATATATAGATAGTGCCCG 366322
Query: 703 ATTTCTATATCCTGCCTGCGAATCGAAGCTCTTATCTCTCTAGCTCATGAATAAATCACC 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366323 ATTTCTATATCCTGCCTGCGAATCGAAGCTCTTATCTCTCTAGCTCATGAATAAATCACC 366382
Query: 643 CGCCGGAAAGGAATAGCCGGAATAGAATGAAGGAATGATTCAATCTTCCATCATTTCAGA 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366383 CGCCGGAAAGGAATAGCCGGAATAGAATGAAGGAATGATTCAATCTTCCATCATTTCAGA 366442
Query: 583 GCCGACGCCTCCTTTTCTGCCTTTCTATCTATACTTCCCATCC 541
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366443 GCCGACGCCTCCTTTTCTGCCTTTCTATCTATACTTCCCATCC 366499
Score = 1011.49 bits (510.0), Expect = 0.0
Identities = 525/530 (99%)
Strand = Plus/Plus
Query: 1 CTAGAATGCCGACTACATGGGAACAGATGTTATATAGGTTGATTCTAATTCTTGCTGCCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123864 CTAGAATGCCGACTACATGGGAACAGATGTTATATAGGTTGATTCTAATTCTTGCTGCCC 123923
Query: 61 GCTCGATTCCGAGGAATAAAGGGAGGGCTTGACCACAATTTCCCAAGTAAGAGATAGAAT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123924 GCTCGATTCCGAGGAATAAAGGGAGGGCTTGACCACAATTTCCCAAGTAAGAGATAGAAT 123983
Query: 121 CTCACTAATTGGAAGGAAAGGGAGGGCTTCGATCCATTGTGATTCGCTTTCTTGGTATGG 180
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 123984 CTCACTAATTGGAAGGAAAAGGAGGGCTTCGATCCATTGTGATTCGGTTTCTTGGTATGG 124043
Query: 181 AGAGGTCTCTGCCATAAAAGAGAGAGCTCCTAAGCCTTATTCTGCAGATCAAAGAGCGAC 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124044 AGAGATCTCTGCCATAAAAGAGAGAGCTCCTAAGCCTTATTCTGCAGATCAAAGAGCGAC 124103
Query: 241 GTAATTCCCCATTCATCCGAAATAGTATTTTAGTAAAGAAGAGAGGCATTCTGGGCCGAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124104 GTAATTCCCCATTCATCCGAAATAGTATTTTAGTAAAGAAGAGAGGCATTCTGGGCCGAC 124163
Query: 301 TACTACGACTACATGCCCATCTAGTGCAGTGGCTTGGAAGCAAGCTACCTTGACCATCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124164 TACTACGACTACATGCCCATCTAGTGCAGTGGCTTGGAAGCAAGCTACCTTGACCATCTT 124223
Query: 361 CCGAAGTTCTAAATAATTTACTGATCAAAGGCTGTAAGGGCGGACTGCTCTACATTCAGC 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124224 CCGAAGTTATAAATAATTTACTGATCAAAGGCTGTAAGGGCGGACTGCTCTACATTCAGC 124283
Query: 421 CACACCACAGTGACCCCGAAGCGATCTTCTTCTAGTTGCGGGACGAAATCCGACAGCCAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124284 CACACCACAGTGACCCCGAAGCGATCTTCTTCTAGTTGCGGGACGAAATCCGACAGCCAA 124343
Query: 481 TTGCTGGCTCTGAATAACCAGCCCAGCAATAAGCTCAATTGTTCCATAAC 530
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 124344 TTGCTGGCTCTGAATAACCAGCCCAGCAATAAGCTCAATTCTTCCATAAC 124393
Score = 46.087 bits (23.0), Expect = 1.44767e-05
Identities = 23/23 (100%)
Strand = Plus/Plus
Query: 327 CAGTGGCTTGGAAGCAAGCTACC 349
|||||||||||||||||||||||
Sbjct: 27632 CAGTGGCTTGGAAGCAAGCTACC 27654
Score = 46.087 bits (23.0), Expect = 1.44767e-05
Identities = 32/35 (91%)
Strand = Plus/Minus
Query: 1604 TCAACAAAACGGAAAAAATTCTTTCTTAGGAAGGA 1570
|||||||||| ||||||||||||||||||||||
Sbjct: 365473 TCAACAAAACTTCAAAAATTCTTTCTTAGGAAGGA 365507
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597