BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig113
(879 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 654.7 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 654.67 bits (330.0), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus/Minus
Query: 338 GGGTATGAATTCCTAAATCCATTTACCTCGACCAGGATCAACTCCTTCTATGCCCCAGGA 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405194 GGGTATGAATTCCTAAATCCATTTACCTCGACCAGGATCAACTCCTTCTATGCCCCAGGA 405253
Query: 278 AAAGGCGAAAAGTAAAGCAGTCATCAAGCCAGAGCTAGTTTCACAGCTACCGATTCGCAC 219
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405254 AAAAGCTAAAAGTAAAGCAGTCATCAAGCCAGAGCTAGTTTCACAGCTACCGATTCGCAC 405313
Query: 218 CCGCGGGTCAAAGAAGACCAATAAAATCTCGATTCAGCATAAGCAAGGGATGAGAGAGGC 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405314 CCGCGGGTCAAAGAAGACCAATAAAATCTCGATTCAGCATAAGCAAGGGATGAGAGAGGC 405373
Query: 158 CTTACGAGGGCTCTTTCCCACTTAATAGATTCATTCCTTCGTTACGGCGGTTGTGGGTAC 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405374 CTTACGAGGGCTCTTTCCCACTTAATAGATTCATTCCTTCGTTACGGCGGTTGTGGGTAC 405433
Query: 98 CTGCCGTTCAGAGATGCTATCAGAGTAGGAAAGTTAGCCAAGTTCTCCTGCCTAGTTTAG 39
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405434 CTGCCGTTCAGAGATGCTATCAGAGTAGGAAAGTTAGCCAAGTTCTCCTGCCTAGTTTAG 405493
Query: 38 ATAAAGCACCCCTTATCGCCCCACGGCATCTGGTTAGG 1
||||||||||||||||||||||||||||||||||||||
Sbjct: 405494 ATAAAGCACCCCTTATCGCCCCACGGCATCTGGTTAGG 405531
Score = 83.7518 bits (42.0), Expect = 2.28709e-17
Identities = 42/42 (100%)
Strand = Plus/Plus
Query: 336 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 377
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 381174
Score = 83.7518 bits (42.0), Expect = 2.28709e-17
Identities = 42/42 (100%)
Strand = Plus/Plus
Query: 369 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 410
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 381174
Score = 83.7518 bits (42.0), Expect = 2.28709e-17
Identities = 42/42 (100%)
Strand = Plus/Plus
Query: 402 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 443
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 381174
Score = 83.7518 bits (42.0), Expect = 2.28709e-17
Identities = 42/42 (100%)
Strand = Plus/Plus
Query: 435 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 476
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 381174
Score = 83.7518 bits (42.0), Expect = 2.28709e-17
Identities = 42/42 (100%)
Strand = Plus/Plus
Query: 468 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 509
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCTGAATTACATCCACCCTCTCAC 381174
Score = 42.1223 bits (21.0), Expect = 7.78021e-05
Identities = 21/21 (100%)
Strand = Plus/Plus
Query: 501 CCCTCTCACTTCGTTCGAGCT 521
|||||||||||||||||||||
Sbjct: 381133 CCCTCTCACTTCGTTCGAGCT 381153
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597