BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig110
(1401 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1544.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1544.75 bits (779.0), Expect = 0.0
Identities = 817/832 (98%)
Strand = Plus/Plus
Query: 1 CTCGAGCGTTCCACTGGGCCCCTGACAGGATAGGTGAGGAATCACTCTGGATCTTCNNNN 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157649 CTCGAGCGTTCCACTGGGCCCCTGACAGGATAGGTGAGGAATCACTCTGGATCTTCTTTT 157708
Query: 61 NNNGGGCTACAACTTCGCCGAGCCGACTAGCATCCCTTTCCACTGTGCATTTTTCGAACA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157709 TTTGGGCTACAACTTCGCCGAGCCGACTAGCATCCCTTTCCACTGTGCATTTTTCGAACA 157768
Query: 121 AAGAAGACGACTATAGGATCGAATTCGCTCTTCAAGAAACTGCTCGTCCCATACCTTCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157769 AAGAAGACGACTATAGGATCGAATTCGCTCTTCAAGAAACTGCTCGTCCCATACCTTCTG 157828
Query: 181 CCTGTCTCATATGTGTGGAACCTGGTCTTTTTCGGTTCCAGCCTCTCCCTCGAATACATA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157829 CCTGTCTCATATGTGTGGAACCTGGTCTTTTTCGGTTCCAGCCTCTCCCTCGAATACATA 157888
Query: 241 GGGTAGGTAGGGCTGGGTGAGAAATGGTTCCCTCTTGCCAATAAACTTTCCCCGGCCTTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157889 GGGTAGGTAGGGCTGGGTGAGAAATGGTTCCCTCTTGCCAATAAACTTTCCCCGGCCTTC 157948
Query: 301 GATTAACCTTACTCATAAAGGGTCTTACGGTCGGGAGAACTACCTAACTAAAGAAAAATA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157949 GATTAACCTTACTCATAAAGGGTCTTACGGTCGGGAGAACTACCTAACTAAAGAAAAATA 158008
Query: 361 GTGTTCTTTCTAAGAGTAGGCGTGGAGAGCTTTTTGCGGGGAAACTTGCAAGTACAGTTT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158009 GTGTTCTTTCTAAGAGTAGGCGTGGAGAGCTTTTTGCGGGGAAACTTGCAAGTACAGTTT 158068
Query: 421 GGGGGGAGGCGGGCGTCGACCCTACCTTATGAGTATTCGGACTATAACAGTTCCGATGAA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158069 GGGGGGAGGCGGGCGTCGACCCTACCTTATGAGTATTCGGACTATAACAGTTCCGATGAA 158128
Query: 481 CAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCA 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158129 CAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCCAGAATTGGGTCAATCA 158188
Query: 541 CGTTTATTAGAAGTCGACAATAGAGTGGTTCTACCAGCAAAGAGCCCTATACGTTTTATT 600
|||||||||||||||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 158189 CGTTTATTAGAAGTCGACAATAGAGTGGTTGTACCAGCAAAAAGTTATATACGTTTTATT 158248
Query: 601 GTAACATCTGCTGATGTACCTCATAGTTGGGCTGTACCTTCCTTAGGTGTCAAATGTGAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158249 GTAACATCTGCTGATGTACCTCATAGTTGGGCTGTACCTTCCTTAGGTGTCAAATGTGAT 158308
Query: 661 GCTGTACCGGGTCGTTTAAATCAGACCTCTATTTCGGTACAACGAGAAGGAGTTTACTAT 720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158309 GCTGTACCTGGTCGTTTAAATCAGACCTCTATTTCGGTACAACGAGAAGGAGTTTACTAT 158368
Query: 721 GGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTATGCCTATCGTCGTAGAAGCT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158369 GGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTATGCCTATCGTCGTAGAAGCT 158428
Query: 781 GTTCCTAGGAAAGATTATGGCTCTCGGGTATCCAATCAATTAATCCCACAAA 832
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 158429 GTTCCTAGGAAAGATTATGGGTCTCGGGTATCCAATCAATTAATCCCACAAA 158480
Score = 48.0694 bits (24.0), Expect = 2.02066e-06
Identities = 24/24 (100%)
Strand = Plus/Plus
Query: 637 CCTTCCTTAGGTGTCAAATGTGAT 660
||||||||||||||||||||||||
Sbjct: 49009 CCTTCCTTAGGTGTCAAATGTGAT 49032
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597