BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig104
(971 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1667.7 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1667.65 bits (841.0), Expect = 0.0
Identities = 935/970 (96%)
Strand = Plus/Minus
Query: 970 CTTAGTGTAGTCTCGGTCCATAGTTTAAGACTCCGTTCCTTATAGCCTAGTCTATATCCA 911
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361391 CTTAGTGTAGTCTCGGTCCATAGTTGTTGACTCCGTTCCTTATAGCCTAGTCTATATCCA 361450
Query: 910 CAGCTGACGTGACTCCGTACCGACGCCTTTCCCTTTGTATAGTATACGGCTAAGTGACTT 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361451 CAGCTGACGTGACTCCGTACCGACGCCTTTCCCTTTGTATAGTATACGGCTAAGTGACTT 361510
Query: 850 CATAACCTCAACCTACTTTTTTGCTTACTGTAGCATAGGCCTTCGTCGGGCTTTCGTCCC 791
| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361511 CGTAACCTCAACGTACTTTTTTTCTTACTGTAGCATAGGCCTTCGTCGGGCTTTCGTCCC 361570
Query: 790 TTCGCCTATAGACGGCGGCTTGGCTTCGCTATCGCTCATGACTTGGTATAGAGCCGTGTA 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361571 TTCGCCTATAGACGGCGGCTTGGCTTCGCTATCGCTCATGACTTGGTATAGAGCCGTGTA 361630
Query: 730 GTCGTCGGTTTTACCACCAGAATGCCTATGAGATAGTGGTAGTGGTCGGCCTTTCGAATG 671
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361631 GTCGTCGGTTTTACCACCAGAATGCCTATGAGATAGT------GGTCGGCCTTTCGAATG 361684
Query: 670 CCTTCTTCCTTACTTTTCTGAGAAGCCCCTTACGACTATACTATAAAGGACAGGGGGGTG 611
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361685 CCTTCTTCCTTACTTTTCTGAGAAGCCCTTTACGACTATACTATAAAGGACAGGGGGGTG 361744
Query: 610 TTCGCCTTTGGAAACTTAGCTACTTAAGTCCTTCTCAGAAAGTCAAAGTAAGGGCGAACG 551
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361745 TTCACCTTTGGAAACTTAGCTACTTAAGTCCTTCTCAGAAAGTCAAAGTAAAGGCGAACG 361804
Query: 550 TCATTCTGTTCTACAGCTACAACACTATATATTTCTTATATATATTAAACATCTTAATAG 491
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 361805 GCATTCTGTTCTACAGCTACAACACTGAATATTTCTTATTAATATTAAACATCTTAATAG 361864
Query: 490 TAGAACTACTTTCGTACTACTAAACAAGGAAACCTTCGGCTCCCTTTGTTTGAATAAACG 431
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 361865 TAGAACTACTTTCGTACTACTAAACAAGGAAACCTTCGGTTCCCTTTGTTTGAATAAACG 361924
Query: 430 CCGCTTATTTTAGTTTACATTCAAACCAAAGTAAACCAAGCCTAAGCGGTCACGACATCT 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361925 CCGCTTATTTTAGTTTACATTCAAACCAAAGTAAACCAAGCCTAAGCGGTCACGACATCT 361984
Query: 370 TGTTGATATTGATTGAGGAGTTTGATGGAGTTTAGCTGACTGAATCCATAAACCTAGAAA 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361985 TGTTGATATTGATTGAGGAGTTTGATGGAGTTTAGCTGACTGAATCCATAAACCTAGAAA 362044
Query: 310 GTCGCCGTCACTGGTACTTTTTTATTAGAATTTTACTCTATAGGTAGGTATCGGCGGGGC 251
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 362045 GTCGCCGTCACTGGTACTTTTTTATTTTAATTTGACTCTATAGGTAGGTATCGGCGGGGC 362104
Query: 250 TTGCGTAATGTAGTTGTAGTTAAGGCTGAAGTAGCGCNNNNNNNNNNAGAAGATCTACTG 191
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 362105 TTGCGTAATGTAGTTGTAGTTAAGGCTGAAGTAGCGCTTTTTATTTTAGAAGATCTACTG 362164
Query: 190 AAGTACCAAAGGCGAACGGGGCTCCCAGGCCGGGACGTCTGGCAGAATGCTTGGCCTCCT 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362165 AAGTACCAAAGGCGAACGGGGCTCCCAGGCCGGGACGTCTGGCAGAATGCTTGGCCTCCT 362224
Query: 130 GCGCTGGAAGCGAGACCTGAAGGGTGAGCTTATGGCGGTTAGCTTCTAGCACTAAATAAT 71
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362225 GCGCTGGAAGCGAGACCCGAAGGGTGAGCTTATGGCGGTTAGCTTCTAGCACTAAATAAT 362284
Query: 70 AGGCATTAGGCATTCTGAGCTGAAAGGAGGCAAGCAAATGAAGGGAGGCATTACGGGCCG 11
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362285 AGGCATTAGGCATTCTGAGCTGAAAGGAGGCAAGCAAATGAAGGGAGGCATTACGGGCCG 362344
Query: 10 ACTACAAGAA 1
||||||||||
Sbjct: 362345 ACTACAAGAA 362360
Score = 157.099 bits (79.0), Expect = 2.10621e-39
Identities = 82/83 (99%)
Strand = Plus/Plus
Query: 322 ATGGATTCAGTCAGCTAAACTCCATCAAACTCCTCAATCAATATCAACAAGATGTCGTGA 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141915 ATGGATTCAGTCAGCTAAACTCCATCAAACTCCTCAATCAATATCAACAAGATGTCGTGA 141974
Query: 382 CCGCTTAGGCTTGGTTTACTTTG 404
|||||||||||||||||| ||||
Sbjct: 141975 CCGCTTAGGCTTGGTTTATTTTG 141997
Score = 87.7165 bits (44.0), Expect = 1.62062e-18
Identities = 53/56 (95%)
Strand = Plus/Plus
Query: 806 CGAAGGCCTATGCTACAGTAAGCAAAAAAGTAGGTTGAGGTTATGAAGTCACTTAG 861
|||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||
Sbjct: 329758 CGAAGGCCTATGCTACAGTAAGAAAAAAAGTACGTTGAGGTTACGAAGTCACTTAG 329813
Score = 75.8223 bits (38.0), Expect = 6.16837e-15
Identities = 44/46 (96%)
Strand = Plus/Plus
Query: 883 AGGCGTCGGTACGGAGTCACGTCAGCTGTGGATATAGACTAGGCTA 928
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 329947 AGGCGTCGGTACGGAGTTGCGTCAGCTGTGGATATAGACTAGGCTA 329992
Score = 69.8753 bits (35.0), Expect = 3.80553e-13
Identities = 35/35 (100%)
Strand = Plus/Plus
Query: 147 TGCCAGACGTCCCGGCCTGGGAGCCCCGTTCGCCT 181
|||||||||||||||||||||||||||||||||||
Sbjct: 10714 TGCCAGACGTCCCGGCCTGGGAGCCCCGTTCGCCT 10748
Score = 50.0517 bits (25.0), Expect = 3.53098e-07
Identities = 25/25 (100%)
Strand = Plus/Plus
Query: 172 CCGTTCGCCTTTGGTACTTCAGTAG 196
|||||||||||||||||||||||||
Sbjct: 167003 CCGTTCGCCTTTGGTACTTCAGTAG 167027
Score = 44.1047 bits (22.0), Expect = 2.17841e-05
Identities = 22/22 (100%)
Strand = Plus/Plus
Query: 754 GAGCGATAGCGAAGCCAAGCCG 775
||||||||||||||||||||||
Sbjct: 158754 GAGCGATAGCGAAGCCAAGCCG 158775
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597