BLASTN 2.2.18 Mar-02-2008
Reference: Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= Contig102
(971 letters)
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
1 sequences; 430597 total letters
Searching................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57013877|ref|NC_006581.1| Nicotiana tabacum mitochondrion ... 1088.8 0.0
>ref|NC_006581.1| Nicotiana tabacum mitochondrion, complete genome
Length = 430597
Score = 1088.81 bits (549.0), Expect = 0.0
Identities = 633/661 (96%)
Strand = Plus/Plus
Query: 37 GGAGAATAGCAAAAGAAAGATCTCAAGGCTATGGGAATATACCACTCCCGATACTCTTCC 96
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384992 GGAGAATAGCAAAAGAAAGATCTCAAGGCTCTGGGAATATACCACTCCCGATACTCTTCC 385051
Query: 97 TCCGTCACCTCTATCTCCAAATCAACGGTTTGATATGATGAATTGAATATCATTACCGAT 156
|||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||
Sbjct: 385052 TCCGTCACCTCTATCTCCAAATCAACTGTTTGATATGCTGAATTTAATATCATTACCAAT 385111
Query: 157 GATTACAATTTCATCAATATATACTAAAAGAAAAAACAGAATAGTTTCCACGTCGACGAG 216
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385112 GATTACAATTTAATCAATATATACTAAAATAAAAAACAGAATAGTTTCCACGTCGACGAG 385171
Query: 217 TAAAAAGGGACTGCCTGGGATTGAAGAAAACCAGCATCCA------CAGAAGCAAATTTG 270
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 385172 TAAAAAGGGACTGCCTGGGATTGAAGAAAACCAGCATCCAGTAAAGCAGAAGAAAATTTT 385231
Query: 271 GCAAACCCATTTCGGGACGCTTGTTTAAGTCCATAAAGGGACTGATTCAGGCGGCAAACT 330
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385232 TCAAACCCATTTCGGGACGCTTGTTTAAGTCCATAAAGGGACTGATTCAGGCGGCAAACT 385291
Query: 331 GAGTTCTCCCCCTGTGGAGAATATCCGTGAGGGAGAGACATGTATACTTCCTTTTTTGGA 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385292 GAGTTCTCCCCCTGTGGAGAATATCCGTGAGGGAGAGACATGTATACTTCCTTTTTTGGA 385351
Query: 391 ACATGTTAAGGCTTTACGCTCTAACTCACCTTCACAACTCTAGGTGTCGTCGCGCCTAAG 450
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 385352 ACATGTTAAGGCTTTACGCTCTAACTCACTGTAACAACTCTAGGTGTCGTCGCGCCTAAG 385411
Query: 451 TTATCATTCTTTTTCCACTGTCTGATTGCAGTAGGGGGTCACGTAGGATGGTTAAGCCAG 510
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385412 TTATCATTCTTTTTCCACTGTCTGATTGCAGTAGGGGTTCACGTAGGATGGTTAAGCCAG 385471
Query: 511 GAGCAGGACCGATACTTTGCTTAGCCAACACATCTTC----TGCCTTCCCTCCAAATATG 566
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385472 GAGCAGGACCGAGACTTTGCTTAGCCAACACATCTTCACATTGCCTTCCCTCCAAATATG 385531
Query: 567 TCTCAATTCACACCTCCAATCCCTTCTCATTAGCTCTCTGATTCTCAGGATAATATTGAA 626
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385532 TCTCAATTCACACCTCCAATCCCTTCTCATTAGCTCTCTGATTCTAAGGATAATATTGAA 385591
Query: 627 ATGTGGATCCTCAGGCCCAGCCATTGTGCAGCTTCTGTATAGAACCCAGGGAGTCCTTCT 686
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 385592 ATGTGGATCCTCAGGCCCAGCCATTGTGCAGCTTCTGTATAGAAACCAGGGAGTCCGTCT 385651
Query: 687 C 687
|
Sbjct: 385652 C 385652
Score = 79.787 bits (40.0), Expect = 3.9507e-16
Identities = 40/40 (100%)
Strand = Plus/Plus
Query: 1 TCAAGAAAAGCGAGAACGGGAACTCCTAGAGCTGCTGGAG 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 384800 TCAAGAAAAGCGAGAACGGGAACTCCTAGAGCTGCTGGAG 384839
Database: /home/vicky/BKPVICKY/BLASTdb/tabaco.fasta
Number of letters in database: 430597
Number of sequences in database: 1
Lambda K H
1.37 0.711 1.31
Matrix: BLASTN matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 1
Length of database: 430597